Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0289 ATGGTTGCAGTGAAGGTGCTTTCTCCATCATCGCAGCAAGGCTACAAAGAATTTCGAGCAGAGGCACAACTACTGATGATTCTTCATCATCGCAACTTGGTTTCTCTTCTTGGATACTGTGATGAAGACGATCACAAGGCACTTATTTATGAATACATGGCCAATGGCAGTTTACAGCAATATTTATCAAACACAAATACGAATACGAATTCAAATACAGATACTCTTAGTTGGACTGGAAGACTTCAAATTGCAGTGGATGCAGCACAAGGATTGGAATATCTACACAATGGTTGCAAACCCCCAATTATCCATAGAGACCTGAAACCTTCAAACATATTATTAGACAAGACAATGCAAGCCAAAATAGCTGATTTTGGATTGTCTAGAACTTTTGCAACTGAAAATGGGTCTCAACTTTTAACTCGAATCGCTGGTACACCTGGATATCTTGATCCTGGAACTCAAACATGTGGAAATGTAAATAAGCAGAGTGATGTGTATAGCTTTGGGATAATCTTGCTTGAGTTGATCACTGGGCAGCCTGCAGTAACAAGATCTTCTCAAGGAAATTTTCACATACTGAACTGGGTGGAACCAATGATCAGAACAGGAGATATTCAAAACATTATTGATCTCAAGTTAGGGGGACAGTTCAACCAAAACTCTGCGTGGGGAATTGTAGAACTTGCCATGTCATGCACACAACCAACTGCACTTAAGAGGCCAGAAATGGGTTATGTTTTGGAAGAGCTTAAGGAGTGTTTGGCAGTCAATCAAAGCAATACAACACAAACTCGTATCATATCGACGCGATTTCTTTCTGAATCGGAAATAGCCCCTTTTGCAAGGTAG 855 40.23 MVAVKVLSPSSQQGYKEFRAEAQLLMILHHRNLVSLLGYCDEDDHKALIYEYMANGSLQQYLSNTNTNTNSNTDTLSWTGRLQIAVDAAQGLEYLHNGCKPPIIHRDLKPSNILLDKTMQAKIADFGLSRTFATENGSQLLTRIAGTPGYLDPGTQTCGNVNKQSDVYSFGIILLELITGQPAVTRSSQGNFHILNWVEPMIRTGDIQNIIDLKLGGQFNQNSAWGIVELAMSCTQPTALKRPEMGYVLEELKECLAVNQSNTTQTRIISTRFLSESEIAPFAR 284
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 2147980 2151187 - MC09g_new0053 Mch9g0289 697171
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0289 284 ProSiteProfiles Protein kinase domain profile. 1 256 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0289 284 SMART serkin_6 1 256 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0289 284 SUPERFAMILY Protein kinase-like (PK-like) 1 252 IPR011009 -
Mch9g0289 284 Pfam Protein tyrosine and serine/threonine kinase 2 252 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0289 284 PANTHER OS07G0107800 PROTEIN-RELATED 2 261 - -
Mch9g0289 284 Gene3D Phosphorylase Kinase; domain 1 1 53 - -
Mch9g0289 284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 103 115 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0289 284 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 53 265 - -
Mch9g0289 284 PIRSF ILK 1 270 - -
Mch9g0289 284 Gene3D Transferase(Phosphotransferase) domain 1 54 277 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g0289 Mch-Chr9:2147980 Mch9g0292 Mch-Chr9:2172293 1.61E-99 dispersed
Mch9g0293 Mch-Chr9:2177202 Mch9g0289 Mch-Chr9:2147980 3.85E-53 dispersed
Mch9g0288 Mch-Chr9:2141620 Mch9g0289 Mch-Chr9:2147980 1.43E-104 tandem
Mch9g0289 Mch-Chr9:2147980 Mch9g0290 Mch-Chr9:2158565 1.02E-96 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77670 PF07714 PK_Tyr_Ser-Thr 4.80E-40 CL0016 Mch PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0289 - - - 0.0