Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g0289 | ATGGTTGCAGTGAAGGTGCTTTCTCCATCATCGCAGCAAGGCTACAAAGAATTTCGAGCAGAGGCACAACTACTGATGATTCTTCATCATCGCAACTTGGTTTCTCTTCTTGGATACTGTGATGAAGACGATCACAAGGCACTTATTTATGAATACATGGCCAATGGCAGTTTACAGCAATATTTATCAAACACAAATACGAATACGAATTCAAATACAGATACTCTTAGTTGGACTGGAAGACTTCAAATTGCAGTGGATGCAGCACAAGGATTGGAATATCTACACAATGGTTGCAAACCCCCAATTATCCATAGAGACCTGAAACCTTCAAACATATTATTAGACAAGACAATGCAAGCCAAAATAGCTGATTTTGGATTGTCTAGAACTTTTGCAACTGAAAATGGGTCTCAACTTTTAACTCGAATCGCTGGTACACCTGGATATCTTGATCCTGGAACTCAAACATGTGGAAATGTAAATAAGCAGAGTGATGTGTATAGCTTTGGGATAATCTTGCTTGAGTTGATCACTGGGCAGCCTGCAGTAACAAGATCTTCTCAAGGAAATTTTCACATACTGAACTGGGTGGAACCAATGATCAGAACAGGAGATATTCAAAACATTATTGATCTCAAGTTAGGGGGACAGTTCAACCAAAACTCTGCGTGGGGAATTGTAGAACTTGCCATGTCATGCACACAACCAACTGCACTTAAGAGGCCAGAAATGGGTTATGTTTTGGAAGAGCTTAAGGAGTGTTTGGCAGTCAATCAAAGCAATACAACACAAACTCGTATCATATCGACGCGATTTCTTTCTGAATCGGAAATAGCCCCTTTTGCAAGGTAG | 855 | 40.23 | MVAVKVLSPSSQQGYKEFRAEAQLLMILHHRNLVSLLGYCDEDDHKALIYEYMANGSLQQYLSNTNTNTNSNTDTLSWTGRLQIAVDAAQGLEYLHNGCKPPIIHRDLKPSNILLDKTMQAKIADFGLSRTFATENGSQLLTRIAGTPGYLDPGTQTCGNVNKQSDVYSFGIILLELITGQPAVTRSSQGNFHILNWVEPMIRTGDIQNIIDLKLGGQFNQNSAWGIVELAMSCTQPTALKRPEMGYVLEELKECLAVNQSNTTQTRIISTRFLSESEIAPFAR | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2147980 | 2151187 | - | MC09g_new0053 | Mch9g0289 | 697171 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g0289 | 284 | ProSiteProfiles | Protein kinase domain profile. | 1 | 256 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g0289 | 284 | SMART | serkin_6 | 1 | 256 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g0289 | 284 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 252 | IPR011009 | - | |
Mch9g0289 | 284 | Pfam | Protein tyrosine and serine/threonine kinase | 2 | 252 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch9g0289 | 284 | PANTHER | OS07G0107800 PROTEIN-RELATED | 2 | 261 | - | - | |
Mch9g0289 | 284 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 53 | - | - | |
Mch9g0289 | 284 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 103 | 115 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch9g0289 | 284 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 53 | 265 | - | - | |
Mch9g0289 | 284 | PIRSF | ILK | 1 | 270 | - | - | |
Mch9g0289 | 284 | Gene3D | Transferase(Phosphotransferase) domain 1 | 54 | 277 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch9g0289 | Mch-Chr9:2147980 | Mch9g0292 | Mch-Chr9:2172293 | 1.61E-99 | dispersed | |
Mch9g0293 | Mch-Chr9:2177202 | Mch9g0289 | Mch-Chr9:2147980 | 3.85E-53 | dispersed | |
Mch9g0288 | Mch-Chr9:2141620 | Mch9g0289 | Mch-Chr9:2147980 | 1.43E-104 | tandem | |
Mch9g0289 | Mch-Chr9:2147980 | Mch9g0290 | Mch-Chr9:2158565 | 1.02E-96 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77670 | PF07714 | PK_Tyr_Ser-Thr | 4.80E-40 | CL0016 | Mch | PK |
Pathway information
