Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g0298 | ATGGGGAAGGCTACAAGATGGTTGAAGGGTCTATTGGGGATGAAAAAAGAGAAGGACCCATCTGGGATTTCGAATTCCACGGCGGTCGCCGGCGCCGGCGACAGAAAGGAGAAGAAAAGGTGGAGCTTTGCGAAGTCCGGCAGGGATTCCGGCCACCCAATTCAAGCCTCTCCTCTGCAGGACTCTGCTTGGTTGAGATCCTACATTTCTGATTCGGAGAAAGAGCAGAACAAGCACGCAATTGCGGTGGCCGCTGCCACCGCCGCCGCCGCAGACGCCGCCGTGGCGGCGGCTCAGGCGGCGGTCGCCGTCGTCAGACTTACAAGCCAGGGAAGAGGGTCTCTGTACATCACCGGAAGAGATAGATGGGCAGCTGTGAAGATTCAAACAGTATTCAGGGGCTTTTTGGCTAGAAAGGCCCTGAGAGCTCTTAAAGGGCTGGTTAAATTGCAGGCTGTGGTGAGGGGATTTCTTGTGAGGAAAAGAGCTGCTGCTACTCTTCACAGTATGCAGGCTCTTTTTCGAGCTCAAACTGCAGTTAGGACTCAAAGAGCTCGAAGATCTTTCAACAAAGAGAACAGGTTTATCCCTGAGATTCGGCCCCGAAAATCTGCGGAACGGTTTGATGAATCAAGAAGTGAATTCCATAGCAAGAGGTTGTCAGTAGCATCATCCTACGAAACCTGCATCAACTCATTGGATGAGAGCCCGAAAATTGTCGAAATCGACACCTACAGAACCCGATCGAGGTCCCGTAGGTTCATCTCCGCTGCATTGTCCGAATGCGGGGGAGATGATGTTCCACTCCAAACAATCTCTTCGCCATCGCCATGTCCGAATCGACCTCGTGTGCCCGATTGCCATAATGTTGTTCTTCGTGACTTCGAATGGTGCTTAATGGGCGACGACTGCAAGTTCCCCACAGCTCACAGCACACCCCGGCTATCGAATTCTTTCGCTGCCTCCGCCAACGTGCCAGTCACGCCGTCGAAGAGTGTGTGCGGGGACAGCTTCTTCCGACCGTACATGAACTACCCGAATTATATGGCGAACACGCAGTCGTTTAAGGCGAAATTGAGGTCTCAAAGCGCCCCAAAGCAGAGGCCAGAGCCAGGGTCCAAGAAGAAGCTCTCATTGAATGAAATAATGGCAGCAAGAAGCAGCTTAAGCAGTGTAAAAATGCAGAGACCAAGCAATCAAATGCTCCAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAATTTGGTTTTTGA | 1251 | 51.64 | MGKATRWLKGLLGMKKEKDPSGISNSTAVAGAGDRKEKKRWSFAKSGRDSGHPIQASPLQDSAWLRSYISDSEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGSLYITGRDRWAAVKIQTVFRGFLARKALRALKGLVKLQAVVRGFLVRKRAAATLHSMQALFRAQTAVRTQRARRSFNKENRFIPEIRPRKSAERFDESRSEFHSKRLSVASSYETCINSLDESPKIVEIDTYRTRSRSRRFISAALSECGGDDVPLQTISSPSPCPNRPRVPDCHNVVLRDFEWCLMGDDCKFPTAHSTPRLSNSFAASANVPVTPSKSVCGDSFFRPYMNYPNYMANTQSFKAKLRSQSAPKQRPEPGSKKKLSLNEIMAARSSLSSVKMQRPSNQMLQEEEEEEEEEEFGF | 416 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2216351 | 2219513 | - | MC09g0241 | Mch9g0298 | 697180 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g0298 | 416 | ProSiteProfiles | IQ motif profile. | 145 | 172 | - | - | |
Mch9g0298 | 416 | PANTHER | IQ-DOMAIN 5-RELATED | 6 | 395 | - | - | |
Mch9g0298 | 416 | Pfam | Protein of unknown function (DUF4005) | 313 | 397 | IPR025064 | - | |
Mch9g0298 | 416 | MobiDBLite | consensus disorder prediction | 16 | 56 | - | - | |
Mch9g0298 | 416 | MobiDBLite | consensus disorder prediction | 383 | 399 | - | - | |
Mch9g0298 | 416 | Gene3D | - | 119 | 172 | - | - | |
Mch9g0298 | 416 | Pfam | IQ calmodulin-binding motif | 148 | 162 | IPR000048 | GO:0005515(InterPro) | |
Mch9g0298 | 416 | Pfam | IQ calmodulin-binding motif | 122 | 142 | IPR000048 | GO:0005515(InterPro) | |
Mch9g0298 | 416 | SMART | iq_5 | 120 | 142 | IPR000048 | GO:0005515(InterPro) | |
Mch9g0298 | 416 | SMART | iq_5 | 143 | 164 | IPR000048 | GO:0005515(InterPro) | |
Mch9g0298 | 416 | ProSiteProfiles | Zinc finger C3H1-type profile. | 281 | 313 | IPR000571 | GO:0046872(InterPro) | |
Mch9g0298 | 416 | MobiDBLite | consensus disorder prediction | 357 | 416 | - | - | |
Mch9g0298 | 416 | MobiDBLite | consensus disorder prediction | 32 | 46 | - | - | |
Mch9g0298 | 416 | ProSiteProfiles | IQ motif profile. | 121 | 149 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch3g0249 | Mch-Chr3:3450578 | Mch9g0298 | Mch-Chr9:2216351 | 9.63E-11 | dispersed | |
Mch6g2701 | Mch-Chr6:28644893 | Mch9g0298 | Mch-Chr9:2216351 | 5.64E-22 | dispersed | |
Mch9g0298 | Mch-Chr9:2216351 | Mch8g2930 | Mch-Chr8:32041781 | 1.47E-07 | dispersed | |
Mch6g0862 | Mch-Chr6:5996478 | Mch9g0298 | Mch-Chr9:2216351 | 1.20E-108 | wgd | |
Mch8g1216 | Mch-Chr8:8718339 | Mch9g0298 | Mch-Chr9:2216351 | 1.11E-82 | wgd |
Pathway information
