Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0346 ATGGATTTCTGGCCAGAGTTCCTCGCAAGCAGTTGGGGTAAAGAATTTGTGGCCGGTGGATTTGGAGGCATCGCCGGCATAATCTCCGGCTACCCACTTGATACTCTTCGAATCAGGCAACAGCAATCGGCTTCTGGCTCCGCCGTGAGAATCTTCCGCAATATCATCGCCCACGATGGCCTTGCTGGCCTCTACAGAGGCATGGCCGCTCCCTTGGCCTCTGTCACTTTCCAGAACGCCGCCGCGTTTCAGATCTACGCCGTCCTCTCTCGGGCATTCAATTCCTATCAATCTAACGGCGGCCCTCCGACCTACAAGGCTGTGGCCTTTGGAGGAGTTGGCACCGGAGCTCTTCAGAGCTTAATCCTGACGCCGGTGGAACTGGTGAAGATTCGCCTCCAGTTGCAGAGTTCGCAACAATCAGCTTCTTCTTCTTCTTCTCACAGAGGCCCTGTGAGCGTCGCCAGGAGCATCTGCAAAACAGAGGGGGTGAGAGGGATTTACAGAGGACTTACCATAACCATGCTCAGAGACGCGCCGGCGCACGGCTTCTACTTCTGGACATATGAGTGCATGAGAGAGCAGCTTCATCCGGGCTGCCGGAAGTCCGGCCAAGAGAGCATGAGCACAATGTTGGTCGCCGGAGGGATGGCTGGAGTCGTCAGCTGGGTTTTTTCTTATCCATTAGATGTGTTAAAGACAAGACTTCAGGCTCAGACACAATCATACAGTGGAATTGTAGATTGTCTTGACAAGAGTGTAAAAGAAGAGGGATACAGAGTTCTGTGGCGAGGGCTTGGGACTGCGGTGGCCAGAGCATTTTTGGTTAATGGCCCCATTTTTGTTGCTTATGAGATGACTTTGAGGTGTTTGTTAAGCAATGGAACTGATCAGTCACGGCAATGA 906 52.65 MDFWPEFLASSWGKEFVAGGFGGIAGIISGYPLDTLRIRQQQSASGSAVRIFRNIIAHDGLAGLYRGMAAPLASVTFQNAAAFQIYAVLSRAFNSYQSNGGPPTYKAVAFGGVGTGALQSLILTPVELVKIRLQLQSSQQSASSSSSHRGPVSVARSICKTEGVRGIYRGLTITMLRDAPAHGFYFWTYECMREQLHPGCRKSGQESMSTMLVAGGMAGVVSWVFSYPLDVLKTRLQAQTQSYSGIVDCLDKSVKEEGYRVLWRGLGTAVARAFLVNGPIFVAYEMTLRCLLSNGTDQSRQ 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2568182 2570253 - MC09g0288 Mch9g0346 697228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0346 301 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 8 291 IPR050567 GO:0006810(PANTHER)|GO:0022857(PANTHER)
Mch9g0346 301 SUPERFAMILY Mitochondrial carrier 11 285 IPR023395 -
Mch9g0346 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 195 IPR018108 -
Mch9g0346 301 Gene3D Mitochondrial carrier domain 8 295 IPR023395 -
Mch9g0346 301 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085(InterPro)
Mch9g0346 301 PRINTS Mitochondrial carrier protein signature 215 237 IPR002067 GO:0055085(InterPro)
Mch9g0346 301 PRINTS Mitochondrial carrier protein signature 168 186 IPR002067 GO:0055085(InterPro)
Mch9g0346 301 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085(InterPro)
Mch9g0346 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 92 IPR018108 -
Mch9g0346 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 290 IPR018108 -
Mch9g0346 301 Pfam Mitochondrial carrier protein 206 292 IPR018108 -
Mch9g0346 301 Pfam Mitochondrial carrier protein 11 95 IPR018108 -
Mch9g0346 301 Pfam Mitochondrial carrier protein 109 196 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g0346 Mch-Chr9:2568182 Mch9g1527 Mch-Chr9:17596480 1.59E-14 dispersed
Mch3g1675 Mch-Chr3:18401016 Mch9g0346 Mch-Chr9:2568182 1.97E-12 transposed
Mch8g1173 Mch-Chr8:8361000 Mch9g0346 Mch-Chr9:2568182 2.11E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0346 K15109 - csv:101222165 469.929