Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g0351 | TTTCGATTGCATTATTTGCACTTGCAGGGAAGTTTGGGGGAGGGGCAAGAAGTAGCGATTAAAAGACTGTCAAAGAATTCAGGACAAGGATTGGTGGAGTTCAAGAATGAAACTATTTTGATTGCCAAATTACAACACACAAATCTGGTTAGGCTTATTGGTTGCTGCATTGATAAAGAAGAGAGGTTGTTGGTGTATGAGTACATGCCCAACAACAGCCTTGACTTCTTCCTCTTTGACTCGAAGAAGAAGTCAATACTAGATTGGGATAAACGCTTACACATAATCCAAGGTATAGTCCAAGGACTACTCTACCTTCACAACTATTCAAGAGTACGAATAATTCATCGAGATCTAAAAGTTAGCAACATCTTACTCGATGACGAGATGAATGCAAAAATATCGGATTTTGGTATGGCTAGGGCCTTCAAGCCATCAGAGGGTGAAGCAAACACGAGCCGAGTTGTTGGTACATATGGCTATATATCACCAGAATATGCAATGGAGGGTATCTTCTCGATAAAGTCAGATGTTTACAGTTTTGGAATACTATTGATGGAGATTATAACAGGTCGAAAGAACTAC | 585 | 39.66 | FRLHYLHLQGSLGEGQEVAIKRLSKNSGQGLVEFKNETILIAKLQHTNLVRLIGCCIDKEERLLVYEYMPNNSLDFFLFDSKKKSILDWDKRLHIIQGIVQGLLYLHNYSRVRIIHRDLKVSNILLDDEMNAKISDFGMARAFKPSEGEANTSRVVGTYGYISPEYAMEGIFSIKSDVYSFGILLMEIITGRKNY | 195 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2588671 | 2589630 | + | MC09g0290 | Mch9g0351 | 697233 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g0351 | 195 | SMART | serkin_6 | 6 | 195 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g0351 | 195 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase B120 | 69 | 160 | - | - | |
Mch9g0351 | 195 | Gene3D | Phosphorylase Kinase; domain 1 | 2 | 68 | - | - | |
Mch9g0351 | 195 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 9 | 194 | - | GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Mch9g0351 | 195 | Pfam | Protein tyrosine and serine/threonine kinase | 14 | 194 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch9g0351 | 195 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 114 | 126 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch9g0351 | 195 | ProSiteProfiles | Protein kinase domain profile. | 1 | 195 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g0351 | 195 | FunFam | Cysteine-rich receptor-like protein kinase 11 | 2 | 68 | - | - | |
Mch9g0351 | 195 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 194 | IPR011009 | - | |
Mch9g0351 | 195 | Gene3D | Transferase(Phosphotransferase) domain 1 | 69 | 195 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch9g0351 | Mch-Chr9:2588671 | Mch9g0396 | Mch-Chr9:2973891 | 4.13E-116 | dispersed | |
Mch9g0349 | Mch-Chr9:2581413 | Mch9g0351 | Mch-Chr9:2588671 | 1.32E-71 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77678 | PF07714 | PK_Tyr_Ser-Thr | 2.40E-42 | CL0016 | Mch | PK |
Pathway information
