Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0363 CTCGATTTCATTTCCCAAAGCGTTCAAAAATACTCTCACAGTTTCCCTCTTGTTTTTCCATATCTATCACTGGTTCTGGCGAAGAGAGAGGAGAGGGAAAACGTTGAAACCGGCATGGGAATCAATTCCAATCGAGTGGAGAACTTGGAAAGTCATGAAACGTTGGTGAGAATTCCGCCGGAGGTAATGCCGGCGTCACCGCAGGCGGCGGACGAGATTCATAAGGTCTGTATGCCGCCGAAGCGGACTACTCTGCAGAAACTCAAGCACAAGTTGTCGGAGGTGTTCTTCCCCGATGACCCGTTCCACAAATTCAAGGACCAATCGTCGTTCCGAAAATTCCTTTTAGGTCTTCAATTTCTGTTCCCGATTTTCCAATGGGGACCGGAGTATACTCTTGCTCTTCTCAAGGCTGACGTCGTCTCTGGTCTCACAATTGCAAGCCTGGCTATTCCCCAGGGGATAAGTTATGCGAAGCTTGCTAATTTGCCTCCAATCATCGGATTATATTCAAGTTTTGTGCCTCCGCTGATATATTCTATCCTTGGAAGCTCCAGACATCTCGCCGTTGGCCCAGTTTCAATTGCCTCCTTGGTCATGGGATCGATGCTGAGTGAAGAAGTCTCCTTCACCAAAGAGCCAACCCTGTACCTTAAGTTGGCTTTTACTGCCACCTTCTTTGCTGGCGTTTTCCAGGCATCTTTGGGTTTGTTAAGGTTAGGCTTTGTGATTGATTTTCTGTCAAAGGCTACCTTAGTTGGCTTTATGGCTGGTGCAGCAGTCATTGTGTCATTGCAACAACTCAAAGGGTTGCTTGGAATTACCCATTTCACCACCAAAATGCAATTTGTTTCTGTCATGTCTTCTGTTTTTCAACGCAAAGATGAGTGGTCCTGGCAAACTATTGTTTTGGGCTTCAGTTTCCTTCTCTTTCTTCTGGGAACAAGGCATATAAGCATCAAGAAACCGAAGCTTTTCTGGATTTCAGCAGCTGCGCCACTGACATCAGTTATTTTGTCCACTCTTTTAGTCTTCCTTCTCAGAACAAAGGTTCCTAGAATCGCAGTGATTGGTCATTTGCCAGAGGGCTTGAATCCTCTATCTCTGAACATGCTGTACTTTTCTGGTTCTGAATTGGGACTTGCCATTAAAACTGGCATTATAACTGGAATTCTTTCCCTGACTGAAGGAATTGCCGTGGGAAGGACGTTTGCTGGTTTGAAAAACTACCAAGTGGATGGGAATAAAGAAATGATGGCTATTGGTTTTATGAACATTGCTGGATCTTGTTCTTCATGTTATGTTACTACAGGATCGTTTTCCCGGTCTGCTGTGAATTATAATGCCGGGGCAGAAACAACTGTCTCCAATGTAGTGATGTCTGCAACAGTGCTCATAACGTTGTTGTTTCTAATGCCACTGTTCCATTACACTCCAAATTTCATCCTAGCAGCCATCATTATAACAGCAGTGGTTGGGCTAATTGATTACCAAGCGGCACTCAGGTTGTGGAAAGTTGACAAACTCGACTTCATAACTTGTCTTTGTTCTTTCTTTGGCGTTCTTTTCATCTCGGTTCCACTGGGTCTTGCCATCGCAGTTGGAGTTTCTGTTTTCAAGATTCTTCTGCATGTCACCAGGCCAAACACCATGGTTTTAGGCAATATTTCTGGGTCTGAAATATTCCAAAACCTCGACCGATACCAAGAAGCCTCAAGAGTGCCTTCATTTCTCATTCTTGCCATTGAATCTCCCATCTACTTTGCAAATTCAACCTATCTTCAAGAAAGGATGCTAAGATGGGTTAGGGAAGAAGAAGATCGGATAAAAGCTAATGAGGGCAGCCCTCCGCTGAAATGTGTAGTCCTAGACATGACAGCTGTGGCATCCATAGACACAAGCGGTATAGAAACAATATGTGAACTTAGAAAGCTGTTGACGCAAAAATCACTGCAGTTTGTTCTTGCAAATCCTACTGGAAACGTGATGGAAAAACTGTACAAATCAAATGTCTTGGAGCCGTTCGAGTTCAATGGCCTGTACCTCTCAGTTGGAGAAGCTGTAAAGGACATTTCTTCTTTATGGAAGAGGCGGCCATAA 2100 44.29 LDFISQSVQKYSHSFPLVFPYLSLVLAKREERENVETGMGINSNRVENLESHETLVRIPPEVMPASPQAADEIHKVCMPPKRTTLQKLKHKLSEVFFPDDPFHKFKDQSSFRKFLLGLQFLFPIFQWGPEYTLALLKADVVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSILGSSRHLAVGPVSIASLVMGSMLSEEVSFTKEPTLYLKLAFTATFFAGVFQASLGLLRLGFVIDFLSKATLVGFMAGAAVIVSLQQLKGLLGITHFTTKMQFVSVMSSVFQRKDEWSWQTIVLGFSFLLFLLGTRHISIKKPKLFWISAAAPLTSVILSTLLVFLLRTKVPRIAVIGHLPEGLNPLSLNMLYFSGSELGLAIKTGIITGILSLTEGIAVGRTFAGLKNYQVDGNKEMMAIGFMNIAGSCSSCYVTTGSFSRSAVNYNAGAETTVSNVVMSATVLITLLFLMPLFHYTPNFILAAIIITAVVGLIDYQAALRLWKVDKLDFITCLCSFFGVLFISVPLGLAIAVGVSVFKILLHVTRPNTMVLGNISGSEIFQNLDRYQEASRVPSFLILAIESPIYFANSTYLQERMLRWVREEEDRIKANEGSPPLKCVVLDMTAVASIDTSGIETICELRKLLTQKSLQFVLANPTGNVMEKLYKSNVLEPFEFNGLYLSVGEAVKDISSLWKRRP 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2664778 2669056 - MC09g0301 Mch9g0363 697245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0363 699 ProSitePatterns SLC26A transporters signature. 165 186 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Mch9g0363 699 ProSiteProfiles STAS domain profile. 567 691 IPR002645 -
Mch9g0363 699 FunFam Sulfate transporter 31 547 693 - -
Mch9g0363 699 SUPERFAMILY SpoIIaa-like 572 690 IPR036513 -
Mch9g0363 699 Pfam STAS domain 570 687 IPR002645 -
Mch9g0363 699 CDD STAS_SulP_like_sulfate_transporter 568 684 - -
Mch9g0363 699 PANTHER SULFATE TRANSPORTER 93 690 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g0363 699 NCBIfam sulfate permease 123 687 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g0363 699 Pfam Sulfate permease family 136 515 IPR011547 GO:0016020(InterPro)
Mch9g0363 699 Gene3D STAS domain 547 692 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g0363 Mch-Chr9:2664778 Mch9g0897 Mch-Chr9:6980842 1.04E-257 dispersed
Mch9g1209 Mch-Chr9:13275016 Mch9g0363 Mch-Chr9:2664778 1.63E-280 transposed
Mch6g0790 Mch-Chr6:5494502 Mch9g0363 Mch-Chr9:2664778 7.23E-195 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0363 K17471 - csv:101203079 1118.22