Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0371 ATGGAGATCAAAGAAAAGAACATATTTTCAAATTCCATCTCTCCATTGATGTCATCTTTTCCGATGACTCTCCTCCTGGTTCTTCTTCTCTGTTTCGTTGTTTACGGCCCGACCGCGGTGTTCGCGGTCGGCCCCGCCGCTTCCTTCATTCCCAAAGACAACTTCCTCATTGATTGTGGTGCCAACAAGGAACTGGGCGCCCTCCCTGATGGGAGAGTGTTCAAATCGGATGAGCAATCCAAGCAGTACTTAGAAGCCAAGGATGACATTATAGCGGCCGCCCCACCGGAGACAAAGGCGCCATCCCCGGTCGACTTGACGGCCAGGATCTTCCTCCAAGAAGCTAGTTACAGCTTTCAGATGACAGAGCCCGGATGGCATTGGGTGCGCCTCCATTTCCTCCCTGTTAAAACCGATGCCTTTGATCTCTTGCAGGCCAAGTTTTCAGTAACCACAGAGAAGTATGTGTTGCTTCACAGTTTCAACATCAACAATGCATCCACATATGTTCTCAAGGAGTTTTTGCTCAACATCACTGATCCTAAATTGTCAATCAAGTTCTTTCCAATGAAGAATTCGGCTGCTTTTGTCAACGCCATCGAGGTGGTCTCGGCCCCAGAAGACTTGATTTCTGACTCGAACATTGAGCTATCTCCAGTCGGGAAGATCGAGGGCCTGGCCAAGTATGCATTTCAGACATTGTACAGGGTAAACATGGGAGGACCTGTAATCACTCCAAGAAATGACACTCTTGGGAGGACGTGGGAGACAGATGAAACTTACAGAATACCAAAAGCTGCTGGTAAGAGAGTGGTTGTTGAGAGCAGCAGCATCAAATACCAAGATGGTTTGGAAGAAAAAGGCATGTTAATTGCTCCTCCAAGTGTGTATGCAAGTGCAGTTGAAATGGGAGAGGCTAATGTCAATGTACCAATTTTCAATATCACATGGAAACTTGAGGCAGATCCCTCATTTGGGTATCTAATTCGCTTGCATTTCTGTGACATTGTCAGCAAAGCTCTCAACAGTCTCTACTTCAATGTTTATGTAAACGGGAAGCCAGCAATAATGAACTTGGATTTGTCGCACAAGCTCGGAAGTTTGGCGACTGCATATTACAAGGATGTTGTGGTTAATGCTTCACAGATTACAGAGGGACTGAAAGTTCAAGTTAGTCCGGCTAATGTCGATACGGGCAATGCGAATGCCATTCTAAATGGCTTGGAGGTATTGAAGATAAGCAATTCTGTTAATAGTCTGGATGGAGAGTTTGGAGTGGATGGTAGGTCTGCAAATGGGTCGAATCGTGGCACGGTCGCTGCAGTTGGGTTTGCGATGATGTTCGGGGCATTTGTCGGGCTGGGTGCCATGGTGATGAAATGGCACAAAAGGCCTCAAGATTGGCAGAAGAGGAATAGTTTCTCTTCTTGGTTGCTTCCTGTACATGCTGGTGACACAAGCTTTATGAGCAAGACCTCATATGGATCACACAAAACCAACATTTACTCCTCTACTCTAGGCCTTGGCAGGTTCTTTACTTTGGCAGAGCTTCAAGAGGCCACCAAGAACTTTGATTCCAATTCAATAATTGGTGTTGGTGGGTTTGGAAATGTGTACCTTGGAGTGATTGATGAAGGGACCAAAGTGGCAGTCAAGAGAGGGAACCCACAATCAGAACAAGGCATTACAGAATTCCAAACAGAAATTCAGATGCTTTCCAAGCTCAGACACAGGCACTTGGTTTCTTTAATTGGGTACTGTGATGAAAACTCTGAGATGATCTTGGTGTATGAGTTCATGTCAAATGGGCCATTCAGAGATCACTTGTATGGCAAGGACTTATCTCCAATATCATGGAAACAAAGGCTAGAGATCTGTATCGGAGCGGCTCGAGGTCTTCATTACCTTCACACAGGAACAGCACAGGGAATCATTCACCGTGATGTCAAAACAACCAACATTTTGCTGGACGAAAACTTCACCGCAAAAGTGGCCGATTTCGGGCTGTCGAAGGATGCTCCAATGGGGCAAGGGCATGTGAGTACAGCAGTGAAGGGAAGCTTTGGGTATTTGGATCCAGAGTACTTTAGGAGACAACAGTTGACAGAAAAATCAGATGTTTATTCCTTTGGAGTTGTTCTTCTTGAGGCTCTATGTGCTAGGCCAGCAATCAACCCATCTTTGACAAGAGAACAAGTAAACTTGGCTGATTGGGCAATGCAGTGCAAGAGAAAGGGGTGTTTGGAAAAAATCATGGATCCTCATCTAGTTGGAGCCATAAATCCCGAGTCCATGAAGAAGTTTGCAGAAGCAGCAGAGAAATGTCTTGCTGAACATGGTGTTGATAGGCCAAGCATGGGGGATGTGCTGTGGAATTTGGAGTATGCTTTACAACTTCAAGAAGCTTTTGCACAGGGCAAGGCTGATGAAGAAAACAAATCCCCGGGCACGGCTGCAGCCCCCCCTGCTACTGCCATTGACGACGACGACGACACTGCACCAAACTCCGACGACCGCCCTGTTGTGCAGCCGGAACAGAATAGGACACCGGCCGAGGTCCAAGCCATTGATGATCACTCAGGAAGTGCAATGTTTGCTCATTTTTCTAACCTCAATGGTAGA 2622 46.45 MEIKEKNIFSNSISPLMSSFPMTLLLVLLLCFVVYGPTAVFAVGPAASFIPKDNFLIDCGANKELGALPDGRVFKSDEQSKQYLEAKDDIIAAAPPETKAPSPVDLTARIFLQEASYSFQMTEPGWHWVRLHFLPVKTDAFDLLQAKFSVTTEKYVLLHSFNINNASTYVLKEFLLNITDPKLSIKFFPMKNSAAFVNAIEVVSAPEDLISDSNIELSPVGKIEGLAKYAFQTLYRVNMGGPVITPRNDTLGRTWETDETYRIPKAAGKRVVVESSSIKYQDGLEEKGMLIAPPSVYASAVEMGEANVNVPIFNITWKLEADPSFGYLIRLHFCDIVSKALNSLYFNVYVNGKPAIMNLDLSHKLGSLATAYYKDVVVNASQITEGLKVQVSPANVDTGNANAILNGLEVLKISNSVNSLDGEFGVDGRSANGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHAGDTSFMSKTSYGSHKTNIYSSTLGLGRFFTLAELQEATKNFDSNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKDLSPISWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKRKGCLEKIMDPHLVGAINPESMKKFAEAAEKCLAEHGVDRPSMGDVLWNLEYALQLQEAFAQGKADEENKSPGTAAAPPATAIDDDDDTAPNSDDRPVVQPEQNRTPAEVQAIDDHSGSAMFAHFSNLNGR 874
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2752302 2754923 + MC09g0309 Mch9g0371 697253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0371 874 SMART serkin_6 524 796 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0371 874 Pfam Protein tyrosine and serine/threonine kinase 528 789 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0371 874 FunFam Receptor-like protein kinase FERONIA 230 415 - -
Mch9g0371 874 CDD STKc_IRAK 530 794 - -
Mch9g0371 874 FunFam Receptor-like protein kinase FERONIA 600 814 - -
Mch9g0371 874 PANTHER OS07G0166700 PROTEIN 512 801 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Mch9g0371 874 MobiDBLite consensus disorder prediction 806 874 - -
Mch9g0371 874 FunFam receptor-like protein kinase FERONIA 487 599 - -
Mch9g0371 874 Pfam Malectin-like domain 57 412 IPR024788 -
Mch9g0371 874 Gene3D Phosphorylase Kinase; domain 1 486 599 - -
Mch9g0371 874 Gene3D - 54 207 - -
Mch9g0371 874 Gene3D - 229 415 - -
Mch9g0371 874 SUPERFAMILY Protein kinase-like (PK-like) 508 791 IPR011009 -
Mch9g0371 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0371 874 FunFam Putative receptor-like protein kinase 54 206 - -
Mch9g0371 874 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524(InterPro)
Mch9g0371 874 ProSiteProfiles Protein kinase domain profile. 524 796 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0371 874 Gene3D Transferase(Phosphotransferase) domain 1 600 818 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1277 Mch-Chr2:8909094 Mch9g0371 Mch-Chr9:2752302 8.48E-72 dispersed
Mch9g0371 Mch-Chr9:2752302 Mch9g1610 Mch-Chr9:18293041 1.11E-96 dispersed
Mch11g1106 Mch-Chr11:7731521 Mch9g0371 Mch-Chr9:2752302 1.98E-257 transposed
Mch1g1619 Mch-Chr1:17238468 Mch9g0371 Mch-Chr9:2752302 3.05E-69 transposed
Mch1g2097 Mch-Chr1:20336445 Mch9g0371 Mch-Chr9:2752302 1.58E-196 transposed
Mch2g0950 Mch-Chr2:6409779 Mch9g0371 Mch-Chr9:2752302 7.90E-235 transposed
Mch3g0103 Mch-Chr3:1272145 Mch9g0371 Mch-Chr9:2752302 9.97E-62 transposed
Mch6g0255 Mch-Chr6:1654735 Mch9g0371 Mch-Chr9:2752302 3.11E-301 transposed
Mch7g0644 Mch-Chr7:11087717 Mch9g0371 Mch-Chr9:2752302 4.34E-64 transposed
Mch8g2954 Mch-Chr8:32248067 Mch9g0371 Mch-Chr9:2752302 3.35E-193 transposed
Mch8g3147 Mch-Chr8:33763076 Mch9g0371 Mch-Chr9:2752302 2.07E-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77679 PF12819 Malectin_like 5.10E-39 CL0202 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0371 - - - 0.0