Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0378 ATGAGAAAAGAAGAAAATCACACCAGGGCAAATATTGGAGAATTCCCAGGTAGAATTACACGTGCTCGGGCTGCTGCATTTAGTGCATCAGCACAGCTGCCTCCAAAAGTTCCTGCACGACAGCCGGAAAAGAGGATTGCTCGGACTAATCTGAAAAGAGCTGCTTCAGATGAAAATAGCTGCCATTCTACTGCTAAATCATCTCGGCCATGTAAGAGAAGGGCTGTGCTTCAGGATGTCAGCAATATATGCTGTGAATCTTCGTACTCTAAATGTTTCGATGCAGCTAAAATTCAGGCCAATAATAGTAAACTGACGATCAGAAACCGTCTCAAGAAGTCCAAAGGAGCCCCATCAGTTGGTGTGGCTCAATCCAAGTTCCCTCCTGATCTTAGAACACAAGGCATACAAGAAAAAGTCCAGTCAAAAGCTAAGTTGAAAGTTGAACATTCAAGTAATTCTGAAGACCATGAGATACATCGTCGAGTAGATGGTATAAAGGAGGAGGCCACAAGCAATCTTCGGCTTGATAATTTGAGTTCTCAAAGTCATTCAGAGTCTCAAAATTTTCAAAATAAAGAGAAAGAGTTGCTTCTGGGGACAAGAAGCAACCTGGACATTACGGACATTGATTGTAATGACAGAGATGCTCAACTGTGCACCGTCTATGCCAATGATATCTATAACAATTTACGTGTTGCTGAGCTAACCAGAAGACCACGTTCCACTTTCATGGAAACAGTGCAGAGTGATATCACCCAAAGCATGCGGGGTATTCTGGTTGATTGGCTTGTAGAGGTATCGGAGGAATACAAGTTAGTACCAGACACACTCTACCTAACTGTATTTTTCATTGATTGGTTTCTCTCTCAAAATCACATTGAGAGACAAAAGCTACAACTGTTGGGTATCACTTGCATGTTAATTGCCTCGAAGTATGAAGAAATTTGTGCACCACGTGTTGAAGACTTTTGTTTCATCACGGACAGCACCTACACGAAAGAGGAGGTATTGAAAATGGAAGGTCAAATATTGAAGCATATGGGCTTTCAACTTTCTGCACCAACAGCAAAATCTTTTCTCAGGAGATATGTTCGAGCTGCACAAACGACGTATAAGACCCCTAGTCTTGAACTCGAGTGCCTTGCCAACTATCTCGCCGAACTAACACTGGTTGACTATGGTTTCTTGAATTTTCTTCCCTCGGTTATAGCTGCATCAGCTGTATTTCTTTCCAAGTGGACATTGGATCAATCAAGTCACCCATGGAATTCAACACTGGAATACTACACCTCGTATAAAGCATCGGATCTGAAACAAACTGTTCTTGCTCTACAAGATTTACAGTTGAACACCAATGGTTGTCCTCTCAGTTCGATTCGCGTCAAGTATCGGCAAGAAAAGTTCAAAGCCGTCGCAACTTTGTCTTCCCCAAAATTACTTGACACGCTATTCTGA 1458 42.18 MRKEENHTRANIGEFPGRITRARAAAFSASAQLPPKVPARQPEKRIARTNLKRAASDENSCHSTAKSSRPCKRRAVLQDVSNICCESSYSKCFDAAKIQANNSKLTIRNRLKKSKGAPSVGVAQSKFPPDLRTQGIQEKVQSKAKLKVEHSSNSEDHEIHRRVDGIKEEATSNLRLDNLSSQSHSESQNFQNKEKELLLGTRSNLDITDIDCNDRDAQLCTVYANDIYNNLRVAELTRRPRSTFMETVQSDITQSMRGILVDWLVEVSEEYKLVPDTLYLTVFFIDWFLSQNHIERQKLQLLGITCMLIASKYEEICAPRVEDFCFITDSTYTKEEVLKMEGQILKHMGFQLSAPTAKSFLRRYVRAAQTTYKTPSLELECLANYLAELTLVDYGFLNFLPSVIAASAVFLSKWTLDQSSHPWNSTLEYYTSYKASDLKQTVLALQDLQLNTNGCPLSSIRVKYRQEKFKAVATLSSPKLLDTLF 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2821132 2828506 + MC09g0316 Mch9g0378 697260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0378 485 Gene3D - 240 353 - -
Mch9g0378 485 CDD CYCLIN_AtCycA-like_rpt2 355 469 - -
Mch9g0378 485 SMART Cyclin_C_2 355 478 IPR004367 -
Mch9g0378 485 CDD CYCLIN_AtCycA_like_rpt1 216 351 - -
Mch9g0378 485 Pfam Cyclin, C-terminal domain 355 477 IPR004367 -
Mch9g0378 485 SUPERFAMILY Cyclin-like 216 352 IPR036915 -
Mch9g0378 485 Pfam Cyclin, N-terminal domain 226 353 IPR006671 -
Mch9g0378 485 PANTHER CYCLINS 207 465 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Mch9g0378 485 Gene3D - 226 474 - -
Mch9g0378 485 FunFam Mitotic cyclin 6 240 340 - -
Mch9g0378 485 PIRSF Cyclin_A_B_D_E 34 484 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Mch9g0378 485 SUPERFAMILY Cyclin-like 355 480 IPR036915 -
Mch9g0378 485 SMART cyclin_7 359 447 IPR013763 -
Mch9g0378 485 SMART cyclin_7 262 346 IPR013763 -
Mch9g0378 485 FunFam Cyclin A1 342 474 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0583 Mch-Chr11:3718821 Mch9g0378 Mch-Chr9:2821132 4.06E-142 dispersed
Mch4g1794 Mch-Chr4:20870820 Mch9g0378 Mch-Chr9:2821132 1.24E-98 dispersed
Mch8g0655 Mch-Chr8:4687106 Mch9g0378 Mch-Chr9:2821132 2.98E-93 dispersed
Mch8g0407 Mch-Chr8:2899062 Mch9g0378 Mch-Chr9:2821132 5.67E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0378 K06627 - csv:101222299 837.025