Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0416 ATGGAAGGTGATTTGCTTCACGGGACGCTTCACGTCACTATCTATGAAGTCGAGGGGTTGCATTCTGGTGGTGGATCCAATGTCTTCAGCATGTTAATGCAAAACATTGAGGAGGCTGTTGGACTTGGCAAAGGAGTTTCCAGACTATATGCGACAGTAGATTTAGAAAAGGCTAGAGTTGGGAGAACACGGATAATAGAAAATGAACCCTCTAACCCAAGATGGTACGAATCATTTCATATTTACTGTGCCCATAGGGCATCGCATGTTATCTTCACCGTGAAGGATGATAATCCCATTGGTGCAACTTTGATTGGACGGGCACATATACCTGTGGAAGACATCATAAATGGGGAGGTATATGAAGGATCAACTCCACTTGTAGATGAAGATAAAAAACCAATTGAAGGAGAACCTAATATTCGTGTCAAAATGCAATACTTCAGTGTTTCTGAGGATCGCAATTGGGGTCGTGGTATAAGAAGTCGTAGATTTCCTGGAGTCCCTTATACATATTACTCACTGAGACAAGGCTGTAAGGTTTCTTTGTATCAAGATGCTCATATCCCTGATAATTTTGTTCCTAAAATACCTCTTGCTGGAGGAAAGCATTATGCACCCCACAGATGTTGGGAAGATATTTTTGATGCCATACAAAACGCAAAGCACCTGATCTACATCACAGGATGGTCTGTTTATACAGAAATTGCCTTAGTAAGGGACTCAAGGAGGCCAAAGCCTGGAGGAGACATCATGCTTGGTGAGCTGCTTAAGAAGAAAGCAAGTGAAGGTGTCAGAGTTCTTATGCTTGTCTGGGATGACAGAACATCTGTCGGTTTACTAAAAAAGGATGGTCTGATGGCTACTCATGATGAAGAAACTGAACATTTCTTTCAAGATACTGATGTGCATTGTGTCTTGTGCCCTCGAAATCCTGACGATGGTGGAAGCATTGTTCAAGATTTACAAATCTCTACCATGTTCACTCATCATCAGAAGATTGTTGTGGTGGATAGCCCAATGCCTAGTGGAGAATCGGATAGGAGGAGAATTGTAAGTTTCATTGGTGGTCTTGATCTCTGCGATGGCAGGTATGACACACCATTCCATTCCCTTTTCAGGACATTGGATACTGCACATCATGACGATTTCCATCAACCAAATTTTCCTGGTGCATTAATCACAAAAGGTGGACCAAGGGAACCTTGGCACGACATCCATTCCCGGCTTGAAGGGCCCATTGCCTGGGATGTCTTGTTCAATTTTGAGCAACGGTGGAAGAAACAAGGTGGGAAGGATGTACTTGTGCAGCTTCGAGAACTTGATGAAATAATTATTCCTCCATCTCCTGTTATGTATCCAGATGACCACGAAACCTGGAATGTTCAGTTGTTTAGATCAATAGATGGTGGGGCAGCTTTTGGCTTCCCCGAAACTCCCGAAGATGCTGCTAGGGCTGGGCTTATCAGTGGGAAAGATAACATTATTGATCGAAGCATTCAGGACGCTTACATTAATGCTATTCGGCGAGCTAAAAACTTTATTTATATTGAAAACCAATATTTCCTTGGAAGTTGTTTTGGATGGTCTCCTGATAATATCAAGCCTGAGGATATTGGTGCTTTGCATTGTATCCCAAGGGAGCTTTCCCTTAAGATCGTTAGTAAGATTAAAGCAGGTGAAAGGTTCACTGTCTATGTAGTTCTCCCAATGTGGCCAGAAGGAATTCCAGAAAGTGGATCCGTTCAGGCGATATTAGATTGGCAAAGGAGAACAATGGAAATGATGTACAAAGACGTGATTCAGGCTCTTAGAGATCACGGTATCGATGAAGACCCTCGTAACTACTTGACATTCTTCTGTCTTGGCAACCGAGAAGTCAAGAGGTCTGGAGAATATGAACCTTCAGAAACACCGGAGGACGATTCTGATTATTTGAGAGCTCAGCAGGCCAGGCGTTTCATGATTTATGTTCATACCAAGATGATGATTGTTGATGACGAGTACATAATCGTTGGATCAGCCAATATCAACCAGAGATCCATGGACGGTGCAAGGGACTCTGAGATAGCAATGGGAGCTTATCAGCCATATCATCTGTCAATCCGTGAACCCGCTCGTGGTCAAGTTCATGGATTCCGTATGGCCCTATGGTACGAACACCTTGGTATGCTTGATGAATCTTTCCTCCAGCCAGAAAGTGAAGGGTGTGCCGCGAAGGTTAACAGAATTGCTGACAAATATTGGGATCTATACTCAAGCGAGACACTTGAGAGGGACTTACCCGGTCACCTCCTCCGCTACCCCATAGGCGTATCCAGTGAAGGAGAAATCACTGAGCTCCCGGGATTTGAGTTCTTCCCTGACACAAAAGCCCGCATACTCGGAACCAAATCTGACTTCCTCCCTCCTATACTCACTACCTAG 2427 43.88 MEGDLLHGTLHVTIYEVEGLHSGGGSNVFSMLMQNIEEAVGLGKGVSRLYATVDLEKARVGRTRIIENEPSNPRWYESFHIYCAHRASHVIFTVKDDNPIGATLIGRAHIPVEDIINGEVYEGSTPLVDEDKKPIEGEPNIRVKMQYFSVSEDRNWGRGIRSRRFPGVPYTYYSLRQGCKVSLYQDAHIPDNFVPKIPLAGGKHYAPHRCWEDIFDAIQNAKHLIYITGWSVYTEIALVRDSRRPKPGGDIMLGELLKKKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETEHFFQDTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSPMPSGESDRRRIVSFIGGLDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGALITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWKKQGGKDVLVQLRELDEIIIPPSPVMYPDDHETWNVQLFRSIDGGAAFGFPETPEDAARAGLISGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCFGWSPDNIKPEDIGALHCIPRELSLKIVSKIKAGERFTVYVVLPMWPEGIPESGSVQAILDWQRRTMEMMYKDVIQALRDHGIDEDPRNYLTFFCLGNREVKRSGEYEPSETPEDDSDYLRAQQARRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLSIREPARGQVHGFRMALWYEHLGMLDESFLQPESEGCAAKVNRIADKYWDLYSSETLERDLPGHLLRYPIGVSSEGEITELPGFEFFPDTKARILGTKSDFLPPILTT 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3077031 3081565 + MC09g0351 Mch9g0416 697298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0416 808 Gene3D Endonuclease Chain A 200 442 - -
Mch9g0416 808 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Mch9g0416 808 Pfam Phospholipase D C terminal 726 798 IPR024632 -
Mch9g0416 808 Gene3D C2 domain 5 156 IPR035892 -
Mch9g0416 808 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 149 IPR035892 -
Mch9g0416 808 SUPERFAMILY Phospholipase D/nuclease 442 734 - -
Mch9g0416 808 Pfam Phospholipase D Active site motif 656 681 IPR001736 GO:0003824(InterPro)
Mch9g0416 808 Pfam Phospholipase D Active site motif 327 364 IPR001736 GO:0003824(InterPro)
Mch9g0416 808 CDD C2_plant_PLD 5 148 - -
Mch9g0416 808 CDD PLDc_pPLDalpha_2 492 701 - -
Mch9g0416 808 SMART pld_4 654 681 IPR001736 GO:0003824(InterPro)
Mch9g0416 808 SMART pld_4 326 364 IPR001736 GO:0003824(InterPro)
Mch9g0416 808 PIRSF PLD_plant 1 808 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Mch9g0416 808 PANTHER PHOSPHOLIPASE D 5 795 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Mch9g0416 808 CDD PLDc_pPLDalpha_1 201 378 - -
Mch9g0416 808 Gene3D Endonuclease Chain A 483 697 - -
Mch9g0416 808 SUPERFAMILY Phospholipase D/nuclease 153 441 - -
Mch9g0416 808 Pfam C2 domain 9 127 IPR000008 -
Mch9g0416 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 364 IPR001736 GO:0003824(InterPro)
Mch9g0416 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 654 681 IPR001736 GO:0003824(InterPro)
Mch9g0416 808 FunFam Phospholipase D delta 201 444 - -
Mch9g0416 808 SMART C2_3c 9 124 IPR000008 -
Mch9g0416 808 FunFam Phospholipase D 467 700 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g2800 Mch-Chr8:31001624 Mch9g0416 Mch-Chr9:3077031 2.05E-27 dispersed
Mch8g1250 Mch-Chr8:9021699 Mch9g0416 Mch-Chr9:3077031 3.69E-201 transposed
Mch8g0457 Mch-Chr8:3252667 Mch9g0416 Mch-Chr9:3077031 0 wgd
Mch8g1128 Mch-Chr8:8063013 Mch9g0416 Mch-Chr9:3077031 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0416 K01115 - csv:101206113 1525.76