Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0454 ATGAATCTTCTTGGTATTTTACTACCCATGTGGGTTTTCTATTCTTTGTTCCCAATAATTGATGCCAGACCAGAAATTGCTGGGTTCTACATTTCTGCTTCTGGGAGAGAAGAACCCATTTCTCGCATTGTGACCAAAATGGAAGCTCAATCCCCAGGAGCTGCAGAGATTAGAGTAGTTCACCACCAAGATTTGAACAAGAGAATTCTCATAGCATTGATTATTTCTTCCACTCTTCTTGGAGCTGTACTGCTGTTCCTCATATGTTTTTGGATATATCGTTGGAAATCGTCGAACCTTGATGATGAAAAATGTCAAAAGAACTTGGAGGTGTCGAAAGGGATGTCGATGACTCCCATCATAGCCAGATTTAATTCCTTGAGGTTGGCTAATTTTAAAGGTTCCGTTTCGACCATCGACTATAAACTGTTGGAAGCAGCAACTGATAACTTCAGCAAAGGCAATGTTTTGGGTGAGGGCGGTATGGGGCATGTCTACAAAGCATGTTTCAATGATAAAATGCTGGCAGCTGTGAAGAGAATAGACAGTGAAGGACCGGATGCCGAAAGAGAATTCGAGAATGAGGTGAACTGGCTGTGTAAAATACGACATCAAAATGTTATCAAACTCTTGGGGTACTGCATTCATGGCGAAACGCGGTTTCTTGTTTACGAGATGATGCAGAATGGATCTTTGGAGTCTCAATTGCACGGACCTTCTCATGGCTCGGCTTTAACTTGGCATCTCCGAATGAAGATCGCTGTCGACGTTGCAAGAGGATTGGAATATCTTCATGAGCACCGAAATCGTCCTGTCGTTCATCGGGATTTAAAGTCATCGAATATCCTTCTAGATTCAGACTTTAATGCCAAGCTCTCTGACTTTGGACTTACTGTAAACTTGGGAGCTCAAAATAAAAACATAAAGCTCTCTGGAACTTTGGGTTATGTCGCCCCGGAATACCTTTTAGACGGTAAACTAACAGATAAAAGCGATGTCTATGCTTTCGGAGTCGTTCTTTTGGAGCTTCTGACCGGTAAAAAGCCCGTCGAGAAGATGGGATCTACTCAATCCCAATCTCTAGTTTCATGGGCAATCCCGCAGCTTAGCGACAGATCAAAGCTACCGAAAATTGTCGATCCCGCAATAAGGGACACAATGGATTTGAAGCACTTATACCAAGTTGCTGCTGTAGCTGTGCTATGTGTACAATCAGAACCGAGCTATCGACCTCTACTTACCGACGTTCTGCATTCGCTCATCCCTCTCGTACCTGTAGAGCTCGGAGGATCGCTAAGAGTTACCGAACCACTGCATCCGAAAGTGGCTTCGACCTGCTAG 1341 43.85 MNLLGILLPMWVFYSLFPIIDARPEIAGFYISASGREEPISRIVTKMEAQSPGAAEIRVVHHQDLNKRILIALIISSTLLGAVLLFLICFWIYRWKSSNLDDEKCQKNLEVSKGMSMTPIIARFNSLRLANFKGSVSTIDYKLLEAATDNFSKGNVLGEGGMGHVYKACFNDKMLAAVKRIDSEGPDAEREFENEVNWLCKIRHQNVIKLLGYCIHGETRFLVYEMMQNGSLESQLHGPSHGSALTWHLRMKIAVDVARGLEYLHEHRNRPVVHRDLKSSNILLDSDFNAKLSDFGLTVNLGAQNKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLTGKKPVEKMGSTQSQSLVSWAIPQLSDRSKLPKIVDPAIRDTMDLKHLYQVAAVAVLCVQSEPSYRPLLTDVLHSLIPLVPVELGGSLRVTEPLHPKVASTC 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3381235 3384501 + MC09g_new0081 Mch9g0454 697336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0454 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0454 446 SUPERFAMILY Protein kinase-like (PK-like) 131 420 IPR011009 -
Mch9g0454 446 PANTHER OS01G0750732 PROTEIN 62 424 IPR050885 -
Mch9g0454 446 ProSitePatterns Protein kinases ATP-binding region signature. 157 179 IPR017441 GO:0005524(InterPro)
Mch9g0454 446 Gene3D Transferase(Phosphotransferase) domain 1 227 425 - -
Mch9g0454 446 ProSiteProfiles Protein kinase domain profile. 151 421 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0454 446 SMART serkin_6 151 421 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0454 446 FunFam Protein kinase superfamily protein 118 226 - -
Mch9g0454 446 Pfam Protein tyrosine and serine/threonine kinase 154 385 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0454 446 Gene3D Phosphorylase Kinase; domain 1 114 226 - -
Mch9g0454 446 CDD STKc_IRAK 157 423 - -
Mch9g0454 446 FunFam probable receptor-like protein kinase At1g80640 227 425 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0484 Mch-Chr8:3404171 Mch9g0454 Mch-Chr9:3381235 1.13E-171 dispersed
Mch9g0454 Mch-Chr9:3381235 Mch5g1795 Mch-Chr5:18360202 5.37E-84 dispersed
Mch8g3060 Mch-Chr8:33084525 Mch9g0454 Mch-Chr9:3381235 6.08E-72 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77681 PF00069 Pkinase 3.60E-48 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0454 - - - 0.0