Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g0463 | ATGCCCGTCGACGGCTCCTCAACTTCCGCCGGAACCGTCTGCGTCACCGGCGCCGGCGGCTTCATTGCCTCCTGGATCGTCAAGCTCCTCCTCGAGAAGGGCTATATCGTCAGAGGAACCGTCAGAAATCCAGACGATCCGAAGAACAGCCATTTGAGAGAACTGGAAGGTGCGGCGGAGCGGCTGAGTTTGCATAAAGCCGATCTTCTCGATTTCGAGAGTCTGAGAGCGGCGATCGATGGCTGCGATGGCGTTTTCCACACGGCCTCGCCTGTGACTGACGATCCGGAGCAAATGGTGGAGCCGGCGGTGAACGGCACGAAGAATGTCATAATCGCGGCGGCCGAAGCCAATGTCCGTCGCGTGGTGTTTACTTCCTCGATTGGCGCAGTCTACATGGACCCCAACCGGGGTCCAGACGAGATCGTAGACGAGTCCTGTTGGAGCGATCTCGAGTTCTGCAAGAACACCAAGAATTGGTACTGCTACGGGAAAGCTGTGGCGGAGCAGGCGGCGTGGGAGGTGGCGAAGGAGAAGGGGGTGGACTTAGTGGTGGTGAATCCGGTGCTGGTGCTGGGGCCATTGTTGCAATCCACCATTAACGCTAGCATAATTCATATACTCAAGTACTTGACTGGATCGGCCAAGACGTACGCCAATTCGGTTCAGGCGTACGTGGACGTGAAGGATGTGGCTCTAGCGCACATTCTCGTCTACGAGACTCCCTCGGCCGCCGGCCGGTATCTCTGCGCCGAGAGTGTGCTCCACCGGGGAGAGGTCGTTGAGATTCTGGCCAAGTTGTTCCGGGAATACCCTATTCCTACCAAGTGCTCAGATGAAGTGAACCCAAGGAAAAAAGCATACAATTTCTCCAACAAGAAGCTGAAGGAGTTGGGATTGGAGTTCACTCCAGTGAAGCAGTGCCTATACGACACCGTTAAGAGCCTGCAAGAGAAAGGTCACCTCCCAATTCCTACCTGCACTGAACCAGCAGAATCCATTAAGATTCAATCTTAG | 1017 | 55.36 | MPVDGSSTSAGTVCVTGAGGFIASWIVKLLLEKGYIVRGTVRNPDDPKNSHLRELEGAAERLSLHKADLLDFESLRAAIDGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEANVRRVVFTSSIGAVYMDPNRGPDEIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVLGPLLQSTINASIIHILKYLTGSAKTYANSVQAYVDVKDVALAHILVYETPSAAGRYLCAESVLHRGEVVEILAKLFREYPIPTKCSDEVNPRKKAYNFSNKKLKELGLEFTPVKQCLYDTVKSLQEKGHLPIPTCTEPAESIKIQS | 338 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 3434303 | 3438438 | + | MC09g_new0086 | Mch9g0463 | 697345 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g0463 | 338 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 12 | 315 | IPR050425 | GO:0016616(PANTHER) | |
| Mch9g0463 | 338 | FunFam | Cinnamoyl-CoA reductase 1 | 4 | 335 | - | - | |
| Mch9g0463 | 338 | CDD | FR_SDR_e | 13 | 300 | - | - | |
| Mch9g0463 | 338 | Pfam | NAD dependent epimerase/dehydratase family | 13 | 245 | IPR001509 | - | |
| Mch9g0463 | 338 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 11 | 317 | IPR036291 | - | |
| Mch9g0463 | 338 | Gene3D | - | 4 | 337 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch8g1069 | Mch-Chr8:7565343 | Mch9g0463 | Mch-Chr9:3434303 | 1.93E-188 | dispersed | |
| Mch8g1070 | Mch-Chr8:7576715 | Mch9g0463 | Mch-Chr9:3434303 | 1.73E-190 | dispersed | |
| Mch10g0601 | Mch-Chr10:4069331 | Mch9g0463 | Mch-Chr9:3434303 | 6.40E-80 | transposed | |
| Mch10g1144 | Mch-Chr10:8583310 | Mch9g0463 | Mch-Chr9:3434303 | 2.16E-50 | transposed | |
| Mch11g0024 | Mch-Chr11:190773 | Mch9g0463 | Mch-Chr9:3434303 | 3.96E-92 | transposed | |
| Mch2g0151 | Mch-Chr2:1140331 | Mch9g0463 | Mch-Chr9:3434303 | 8.70E-100 | transposed | |
| Mch3g0069 | Mch-Chr3:772385 | Mch9g0463 | Mch-Chr9:3434303 | 2.44E-92 | transposed | |
| Mch5g0464 | Mch-Chr5:3135608 | Mch9g0463 | Mch-Chr9:3434303 | 3.30E-29 | transposed | |
| Mch9g1964 | Mch-Chr9:21037548 | Mch9g0463 | Mch-Chr9:3434303 | 2.50E-74 | transposed | |
| Mch8g1068 | Mch-Chr8:7559981 | Mch9g0463 | Mch-Chr9:3434303 | 3.07E-40 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch9g0463 | K09753 | - | csv:101213412 | 620.157 |