Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0471 ATGGGGATATATCTGAGCTCCCCCAAAACAGAAAAGGCATCAGAAGATGGTGAGAACAACAGGCTTCGATATGGCCTATCATCTATGCAAGGGTGGCGTGCAACCATGGAAGATGCGCATGCAGCCTATCCAGATTTGGACACATCAACTTCTTTCTTTGGCGTTTATGATGGCCATGGAGGTAAAGCAGTGTCCAAGTTCTGTGCCAAGTATCTTCATCAACAGGTGCTCAAGCATGAATCATACATGGCTGGAGATTTGGGCAGTTCAGTACAGAAGGCATTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGATGGAGAGAATTAGCTATTTTGGGAGACAAAATGGACAAGATTTCTGGTATGATAGAAGGGCTTATATGGTCTCCTAAGAGTAATGAAGCTAACAATCATGTGGATGATTGGCCTCTGGAGGAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGCACAGCTTGTGTTGCAATTATAAGAAGTAACCAACTTGTGGTGGCAAATGCTGGTGATTCGCGCTGTGTCATTTCCAGAAAGGGCCAGGCATATAATCTATCTAAAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGGATCCTGAAAGCCGGTGGTTTCATCCGAGTAGGTCGTGTCAATGGAAGTCTCAACTTGGCACGAGCTATAGGAGATATGGAATTTAAGCAGAATAAAACCATGCCCGCAGAAAAGCAGATTGTAACTGCTAATCCTGATGTAACAACTGTTGAGCTTTGCGAGGACGATGAGTTTCTTGTTCTTGCCTGTGATGGGATCTGGGATTGCATGTCCAGCCAACAATTGGTCGACTACATTAGAGATCAATTAAAAACGGAAAGTAAACTCTCAGTTGTTTGTGAGAGAGTATTTGACAGATGCTTGGCACCTACAGCTGGTGGTGAAGGATGTGACAACATGACTATGATCTTGGTTCAGTTTAAGAAACCTTTTAACCAAAGTGCTACTTCTCCTGAGGAGCAGCCTTCATCATCCAATCAACCGCCTGGTCCAAGTGAAAGCTCTTCAAAGACTGAATAG 1083 44.41 MGIYLSSPKTEKASEDGENNRLRYGLSSMQGWRATMEDAHAAYPDLDTSTSFFGVYDGHGGKAVSKFCAKYLHQQVLKHESYMAGDLGSSVQKAFLRMDEMMRGQRGWRELAILGDKMDKISGMIEGLIWSPKSNEANNHVDDWPLEEGPHSDFHGPNAGSTACVAIIRSNQLVVANAGDSRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNKTMPAEKQIVTANPDVTTVELCEDDEFLVLACDGIWDCMSSQQLVDYIRDQLKTESKLSVVCERVFDRCLAPTAGGEGCDNMTMILVQFKKPFNQSATSPEEQPSSSNQPPGPSESSSKTE 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3484858 3490235 - MC09g0382 Mch9g0471 697353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0471 360 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169(InterPro)
Mch9g0471 360 MobiDBLite consensus disorder prediction 332 360 - -
Mch9g0471 360 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Mch9g0471 360 MobiDBLite consensus disorder prediction 1 20 - -
Mch9g0471 360 Pfam Protein phosphatase 2C 156 313 IPR001932 -
Mch9g0471 360 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Mch9g0471 360 CDD PP2Cc 23 328 IPR001932 -
Mch9g0471 360 Gene3D - 1 329 IPR036457 -
Mch9g0471 360 SMART PP2C_SIG_2 28 328 IPR001932 -
Mch9g0471 360 PANTHER PROTEIN PHOSPHATASE 2C 18 329 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Mch9g0471 360 SMART PP2C_4 13 326 IPR001932 -
Mch9g0471 360 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g3003 Mch-Chr8:32638254 Mch9g0471 Mch-Chr9:3484858 3.23E-35 dispersed
Mch9g0471 Mch-Chr9:3484858 Mch9g0624 Mch-Chr9:4663637 9.26E-36 dispersed
Mch11g0493 Mch-Chr11:3129560 Mch9g0471 Mch-Chr9:3484858 5.45E-212 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0471 K17499 - csv:101214132 658.677