Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0473 ATGATCATCAACGTGAAGGATTCGACGATGGTGAGGCCGGCGGAGGAGACGCCGCGCCGGAGTCTCTGGAACTCGAACGTCGATCTGGTGGTGCCGAGTATGCACACGCCGAGCGTCTACTTCTACCGGCCGAACGCCGCCTCCGATTTCTTCGACTCTCAGGTTCTCAAGGAAGGCCTCAGCAAGGCTCTTGTGCCGTTCTATCCAATGGCCGGACGGCTCCGGCGCGACGAGGACGGCCGAATCGAGATCGACTGTAATGCGGAAGGCGTGCTTCTTGTCGAGGCGGAGACCACGGCGGTTATCGATGATTTCGGCGATTTCGCACCTACTTTGCAGCTCCGGCAGCTTATTCCGACGGTCGACTACTCCGGCGGAATCGAGTCGTACCCCTTGTTGGTCTTACAGGTGACTTACTTTAAATGCGGCGGTGTTTCACTTGGCGTCGGAATGCAGCACCACGTCGCGGATGGCTTCTCGGGCCTTCACTTTGTAAACGCCTGGTCCGATATGTCACGCGGCCTCGACCTGAAGCTCGAGCCATTCATAGATCGGAGCCTCCTTCGTGCTAGGGACCCACCTCAGCCGGCCTTCCGACACATCGAATACCAACCAGCCCCACCGATGAAAACCCCGGTCCAACCAGACCCAACCGGCTCGACCGTCTCCATCTTCAAATTCAGCCGGGAGCAGCTGAATTTACTGAAAGCCAAATGCAAAGAAAACGGCAACACCACCAACTACAGCTCCTACGAGATGCTCTCCGGCCACGTGTGGCGCTGCACGTGCAAGGCGCGTGACCTGCCAGACGATCAGGACACGAAGCTCTACATCGCCACCGACGGCCGGTCTCGCCTCCGCCCGCCGCTCCCCAACGGCTATTTCGGCAACGTGATCTTCACGGCGACGCCGGTGGCCGTCGCCGGCGACCTGATGTCGAATCCGACGTGGTACGCCGCGAGTAAGATCCACGACGCGCTGGCGCGAATGGACAACGATTATTTGAGATCGGCTCTGGACTATCTCGAGATTCAGCCCGACATATCGGCGCTGGTCCGCGGCGCTCATACTTTCCGGTGCCCGAATTTGGGGATCACGAGCTGGGTCCGGCTGCCGATTCATGACGCTGATTTCGGGTGGGGCCGGCCGATTTTTATGGGCCCCGGCGGGATTGCGTACGAGGGATTGTCCTTCATAATCCCCAGTGCTTCCGATGACGGCAGCTTGTCGGTGGCGATTTCGCTGCAGAATCGGCATATGAAGGTGTTTGAGAAGCTGTTCTTTGATATCTGA 1293 58.86 MIINVKDSTMVRPAEETPRRSLWNSNVDLVVPSMHTPSVYFYRPNAASDFFDSQVLKEGLSKALVPFYPMAGRLRRDEDGRIEIDCNAEGVLLVEAETTAVIDDFGDFAPTLQLRQLIPTVDYSGGIESYPLLVLQVTYFKCGGVSLGVGMQHHVADGFSGLHFVNAWSDMSRGLDLKLEPFIDRSLLRARDPPQPAFRHIEYQPAPPMKTPVQPDPTGSTVSIFKFSREQLNLLKAKCKENGNTTNYSSYEMLSGHVWRCTCKARDLPDDQDTKLYIATDGRSRLRPPLPNGYFGNVIFTATPVAVAGDLMSNPTWYAASKIHDALARMDNDYLRSALDYLEIQPDISALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSASDDGSLSVAISLQNRHMKVFEKLFFDI 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3504058 3509059 + MC09g0384 Mch9g0473 697355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0473 430 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Mch9g0473 430 FunFam Tryptamine hydroxycinnamoyl transferase 209 428 - -
Mch9g0473 430 Gene3D - 1 205 IPR023213 -
Mch9g0473 430 Gene3D - 210 430 IPR023213 -
Mch9g0473 430 SUPERFAMILY CoA-dependent acyltransferases 197 415 - -
Mch9g0473 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 421 IPR050317 GO:0016747(PANTHER)
Mch9g0473 430 Pfam Transferase family 3 425 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0547 Mch-Chr1:9756294 Mch9g0473 Mch-Chr9:3504058 8.05E-98 dispersed
Mch1g0548 Mch-Chr1:9773594 Mch9g0473 Mch-Chr9:3504058 5.26E-45 dispersed
Mch6g0037 Mch-Chr6:249159 Mch9g0473 Mch-Chr9:3504058 3.71E-75 dispersed
Mch7g0842 Mch-Chr7:13003606 Mch9g0473 Mch-Chr9:3504058 2.34E-12 dispersed
Mch8g2504 Mch-Chr8:27968432 Mch9g0473 Mch-Chr9:3504058 1.34E-55 dispersed
Mch9g0473 Mch-Chr9:3504058 Mch9g2415 Mch-Chr9:23836650 2.28E-38 dispersed
Mch9g0473 Mch-Chr9:3504058 Mch11g0161 Mch-Chr11:1053389 2.41E-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0473 K13065 - csv:101214857 816.994