Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0474 ATGACTTGCAAGAGCGAAGGCAAAGGCATCGGCATTGATCTCGGCACCACCTACAGCTGCGTCGCCGTCTGGCAAAACGATCGTGTAGAGATTATTGCCAATGATCAAGGCAACAGAACCACTCCCTCCTACGTCGCTTTCACCGATACCGAACGACTGATCGGCGATGCGGCCAAGAATCAGGTCGCGATGAATCCGCAGAATACTGTTTTCGACGCCAAGAGGCTCATTGGCCGCAGATTCTCCGACTCTTCCGTTCAAAGCGATATGAAGCTCTGGCCATTCAAGGTCGTTTCAGGGCACAATGTAAATAACGCCGTGATTACAGTCCCTGCATATTTTAACGATTCGCAGCGGCAGGCTACCAAGGACGCCGGAGCAATTGCCGGAATCTTCGAAGTGAAAGCCACCGCCGGAGACACTCATCTCGGCGGCGAGGATTTCGATAACCGCCTCGTGAACCACTTCGCGGCGGAGTTCAAAAGGAAACACAAGAAGGACATCAGCGGCAATCCCAGAGCTCTCCGTCGGCTGAGAACGGCCTGCGAAAGAGCGAAACGAACTCTATCTTCCACAACGCAAACCACAATCGAAATCGATTCGCTCTACGAAGGGATCGATTTCTACGCCACAATTACCAGAGCGAGATTCGAGGAATTGAACATGGATCTGTTCAGAAGATGTATGGAGCCAGTGGAGAAATGTCTGCGAGATTCCAAAATTGACAAGGGACAAGTTCACGACGTCGTTTTAGTAGGCGGTTCCACAAGAATCCCCAAAGTCCAGCAACTATTGCAGGATTTCTTCAACGGGAAAGAGCTCTGCAAGAGCATAAACCCTGACGAAGCCGTCGCCTACGGTGCCGCCGTACAGGCGGCGATTCTGTGCGGCGAAGGCAACGAGAAGGTCCAAGATCTGCTTCTCCTCGACGTCACGCCTCTGAGCCTCGGAATCGAAACCGCCGGCGGAGTGATGACCGTGTTAATTCCAAGAAACACGACGGTTCCGAAGAAGAAGGAGCAGGTTTTCTCGACTTATTCCGACAATCAGACCAGCGTTTTGATCCAAGTTTACGAAGGGGAAAGAGCAAGAACAAAAGACAACAACCTTCTCGGAACATTTGAGCTCAAGGGAATACCTCCGGCGCCGAGAGGGGTGCCTCAAATCAACGTCTGCTTCGACATCGACGCGAACGGAATTCTGAATGTCACGGCGGAGGACAAGACGGCCGGAGTTAAGAACACGATCACGATTACCAACGACAAAGGAAGACTGAGCAGAGATGAGATCGAGAGGATGGTGCAGGAGGCGGAGAAGTACAAGGCAGAGGACGAACAGATTGAGAAGGCGATTGACGAGGCGATGGAGTGGCTCGAGAGGAACCAGTTGGCAGAGGTGGATGAATTTGAAGACAAGCTCAAGGAATTGGAGGGGATCTGTAATCCCATAATCGCTAAGCTTTACCAGGGTGCCGGCGGCGGCGGCGGCTGCGTCCGGGCCGACCATTGA 1509 52.68 MTCKSEGKGIGIDLGTTYSCVAVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDSSVQSDMKLWPFKVVSGHNVNNAVITVPAYFNDSQRQATKDAGAIAGIFEVKATAGDTHLGGEDFDNRLVNHFAAEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYATITRARFEELNMDLFRRCMEPVEKCLRDSKIDKGQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILCGEGNEKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTVPKKKEQVFSTYSDNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVPQINVCFDIDANGILNVTAEDKTAGVKNTITITNDKGRLSRDEIERMVQEAEKYKAEDEQIEKAIDEAMEWLERNQLAEVDEFEDKLKELEGICNPIIAKLYQGAGGGGGCVRADH 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3511734 3513709 - MC09g_new0090 Mch9g0474 697356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0474 502 FunFam Heat shock 70 kDa 144 227 - -
Mch9g0474 502 SUPERFAMILY Actin-like ATPase domain 130 296 IPR043129 -
Mch9g0474 502 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 301 452 IPR029047 -
Mch9g0474 502 Pfam Hsp70 protein 130 473 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Mch9g0474 502 Pfam Hsp70 protein 10 102 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Mch9g0474 502 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 429 496 IPR029048 -
Mch9g0474 502 Gene3D - 276 293 - -
Mch9g0474 502 FunFam heat shock 70 kDa protein-like 71 122 - -
Mch9g0474 502 Gene3D - 101 130 - -
Mch9g0474 502 FunFam Heat shock cognate 70 kDa protein 2 228 275 - -
Mch9g0474 502 PANTHER HEAT SHOCK PROTEIN 70KDA 130 464 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Mch9g0474 502 Gene3D Actin; Chain A, domain 4 145 227 - -
Mch9g0474 502 Gene3D - 131 275 - -
Mch9g0474 502 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 298 441 IPR029047 -
Mch9g0474 502 Gene3D - 2 100 - -
Mch9g0474 502 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Mch9g0474 502 FunFam heat shock 70 kDa protein-like 3 142 - -
Mch9g0474 502 PRINTS 70kDa heat shock protein signature 106 126 - -
Mch9g0474 502 PRINTS 70kDa heat shock protein signature 386 402 - -
Mch9g0474 502 PRINTS 70kDa heat shock protein signature 8 21 - -
Mch9g0474 502 Coils Coil 430 479 - -
Mch9g0474 502 Gene3D - 443 490 IPR029048 -
Mch9g0474 502 FunFam Heat shock 70 kDa 300 454 - -
Mch9g0474 502 SUPERFAMILY Actin-like ATPase domain 10 131 IPR043129 -
Mch9g0474 502 ProSitePatterns Heat shock hsp70 proteins family signature 3. 249 263 IPR018181 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0608 Mch-Chr6:4139539 Mch9g0474 Mch-Chr9:3511734 2.64E-291 dispersed
Mch6g1960 Mch-Chr6:22077131 Mch9g0474 Mch-Chr9:3511734 3.56E-205 dispersed
Mch9g0474 Mch-Chr9:3511734 Mch4g2128 Mch-Chr4:23316148 2.89E-291 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0474 K03283 - cit:102625591 828.55