Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g0474 | ATGACTTGCAAGAGCGAAGGCAAAGGCATCGGCATTGATCTCGGCACCACCTACAGCTGCGTCGCCGTCTGGCAAAACGATCGTGTAGAGATTATTGCCAATGATCAAGGCAACAGAACCACTCCCTCCTACGTCGCTTTCACCGATACCGAACGACTGATCGGCGATGCGGCCAAGAATCAGGTCGCGATGAATCCGCAGAATACTGTTTTCGACGCCAAGAGGCTCATTGGCCGCAGATTCTCCGACTCTTCCGTTCAAAGCGATATGAAGCTCTGGCCATTCAAGGTCGTTTCAGGGCACAATGTAAATAACGCCGTGATTACAGTCCCTGCATATTTTAACGATTCGCAGCGGCAGGCTACCAAGGACGCCGGAGCAATTGCCGGAATCTTCGAAGTGAAAGCCACCGCCGGAGACACTCATCTCGGCGGCGAGGATTTCGATAACCGCCTCGTGAACCACTTCGCGGCGGAGTTCAAAAGGAAACACAAGAAGGACATCAGCGGCAATCCCAGAGCTCTCCGTCGGCTGAGAACGGCCTGCGAAAGAGCGAAACGAACTCTATCTTCCACAACGCAAACCACAATCGAAATCGATTCGCTCTACGAAGGGATCGATTTCTACGCCACAATTACCAGAGCGAGATTCGAGGAATTGAACATGGATCTGTTCAGAAGATGTATGGAGCCAGTGGAGAAATGTCTGCGAGATTCCAAAATTGACAAGGGACAAGTTCACGACGTCGTTTTAGTAGGCGGTTCCACAAGAATCCCCAAAGTCCAGCAACTATTGCAGGATTTCTTCAACGGGAAAGAGCTCTGCAAGAGCATAAACCCTGACGAAGCCGTCGCCTACGGTGCCGCCGTACAGGCGGCGATTCTGTGCGGCGAAGGCAACGAGAAGGTCCAAGATCTGCTTCTCCTCGACGTCACGCCTCTGAGCCTCGGAATCGAAACCGCCGGCGGAGTGATGACCGTGTTAATTCCAAGAAACACGACGGTTCCGAAGAAGAAGGAGCAGGTTTTCTCGACTTATTCCGACAATCAGACCAGCGTTTTGATCCAAGTTTACGAAGGGGAAAGAGCAAGAACAAAAGACAACAACCTTCTCGGAACATTTGAGCTCAAGGGAATACCTCCGGCGCCGAGAGGGGTGCCTCAAATCAACGTCTGCTTCGACATCGACGCGAACGGAATTCTGAATGTCACGGCGGAGGACAAGACGGCCGGAGTTAAGAACACGATCACGATTACCAACGACAAAGGAAGACTGAGCAGAGATGAGATCGAGAGGATGGTGCAGGAGGCGGAGAAGTACAAGGCAGAGGACGAACAGATTGAGAAGGCGATTGACGAGGCGATGGAGTGGCTCGAGAGGAACCAGTTGGCAGAGGTGGATGAATTTGAAGACAAGCTCAAGGAATTGGAGGGGATCTGTAATCCCATAATCGCTAAGCTTTACCAGGGTGCCGGCGGCGGCGGCGGCTGCGTCCGGGCCGACCATTGA | 1509 | 52.68 | MTCKSEGKGIGIDLGTTYSCVAVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDSSVQSDMKLWPFKVVSGHNVNNAVITVPAYFNDSQRQATKDAGAIAGIFEVKATAGDTHLGGEDFDNRLVNHFAAEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYATITRARFEELNMDLFRRCMEPVEKCLRDSKIDKGQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILCGEGNEKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTVPKKKEQVFSTYSDNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVPQINVCFDIDANGILNVTAEDKTAGVKNTITITNDKGRLSRDEIERMVQEAEKYKAEDEQIEKAIDEAMEWLERNQLAEVDEFEDKLKELEGICNPIIAKLYQGAGGGGGCVRADH | 502 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3511734 | 3513709 | - | MC09g_new0090 | Mch9g0474 | 697356 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g0474 | 502 | FunFam | Heat shock 70 kDa | 144 | 227 | - | - | |
Mch9g0474 | 502 | SUPERFAMILY | Actin-like ATPase domain | 130 | 296 | IPR043129 | - | |
Mch9g0474 | 502 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 301 | 452 | IPR029047 | - | |
Mch9g0474 | 502 | Pfam | Hsp70 protein | 130 | 473 | IPR013126 | GO:0005524(InterPro)|GO:0140662(InterPro) | |
Mch9g0474 | 502 | Pfam | Hsp70 protein | 10 | 102 | IPR013126 | GO:0005524(InterPro)|GO:0140662(InterPro) | |
Mch9g0474 | 502 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 429 | 496 | IPR029048 | - | |
Mch9g0474 | 502 | Gene3D | - | 276 | 293 | - | - | |
Mch9g0474 | 502 | FunFam | heat shock 70 kDa protein-like | 71 | 122 | - | - | |
Mch9g0474 | 502 | Gene3D | - | 101 | 130 | - | - | |
Mch9g0474 | 502 | FunFam | Heat shock cognate 70 kDa protein 2 | 228 | 275 | - | - | |
Mch9g0474 | 502 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 130 | 464 | IPR013126 | GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro) | |
Mch9g0474 | 502 | Gene3D | Actin; Chain A, domain 4 | 145 | 227 | - | - | |
Mch9g0474 | 502 | Gene3D | - | 131 | 275 | - | - | |
Mch9g0474 | 502 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 298 | 441 | IPR029047 | - | |
Mch9g0474 | 502 | Gene3D | - | 2 | 100 | - | - | |
Mch9g0474 | 502 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 12 | 19 | IPR018181 | - | |
Mch9g0474 | 502 | FunFam | heat shock 70 kDa protein-like | 3 | 142 | - | - | |
Mch9g0474 | 502 | PRINTS | 70kDa heat shock protein signature | 106 | 126 | - | - | |
Mch9g0474 | 502 | PRINTS | 70kDa heat shock protein signature | 386 | 402 | - | - | |
Mch9g0474 | 502 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
Mch9g0474 | 502 | Coils | Coil | 430 | 479 | - | - | |
Mch9g0474 | 502 | Gene3D | - | 443 | 490 | IPR029048 | - | |
Mch9g0474 | 502 | FunFam | Heat shock 70 kDa | 300 | 454 | - | - | |
Mch9g0474 | 502 | SUPERFAMILY | Actin-like ATPase domain | 10 | 131 | IPR043129 | - | |
Mch9g0474 | 502 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 249 | 263 | IPR018181 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g0608 | Mch-Chr6:4139539 | Mch9g0474 | Mch-Chr9:3511734 | 2.64E-291 | dispersed | |
Mch6g1960 | Mch-Chr6:22077131 | Mch9g0474 | Mch-Chr9:3511734 | 3.56E-205 | dispersed | |
Mch9g0474 | Mch-Chr9:3511734 | Mch4g2128 | Mch-Chr4:23316148 | 2.89E-291 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch9g0474 | K03283 | - | cit:102625591 | 828.55 |