Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g0483 | TGCCCTTTAAAATTGCCATTTTCCATTGGACGACTCAGTCCTTTCTCCTCTCTCTCCTCTCTCTTTCTCTCTCTTCTTCTTCCTGCTCCATCTCCTTCTCTGCTCGTTTTAATGGGGAAGATCTCCCATCCGCCGCACAAGAATTCCATTTCCACCACTGATAATACTCACTCAACTACTCCTCGCCATGAGAGGAAGCTACAGAAGCGCAAGCGTAAGACTGTTCCGCGAGATTCTCCGGCTCAGCGTAGCTCTGTCTACCGCGGAGTCACCAGGCATAGATGGACGGGACGGTATGAGGCACATTTGTGGGATAAGAATTGCTGGAATGAAGGACAGAACAAGAAAGGAAGACAAGGAGCGTATGATGATGAAGCAGCAGCGGCTCATGCTTACGACCTGGCGGCACTCAAGTACTGGGGAACTGAAACTGTTCTTAACTTTCCATTATTGACGTACCAAGACGAACTCAAAGAGATGGAAGGTCAATCAAGAGAAGAGTATATTGGATTTTTGAGAAGGAAGAGTAGCGGTTTTTCTCGCGGGGTTTCAAAGTATAGAGGTGTAGCAAGACACCATCATAATGGAAGATGGGAAGCTCGAATTGGCAGAGTGCTTGGCAACAAATACCTTTACCTTGGAACATATGCTACCCAGGAAGAAGCTGCCACAGCTTACGACATGGCGGCCATCGAGTACCGTGGCCTTAACGCCGTTACAAATTTCGACCTCAGCCGTTACATCAAATCCCTCCGTCCTAGGCAACAACAGAGTATTATCTCCAACAACCGTCCTCCAAACCCTAACGCCGGCGAATTACCTGCTCTAGAATTTGACCCCAATTCCCTCCTCGGATTTACTTTCCCGTCGCAATGTTCCAGCTCCGGCCAACCCGCCACCGCGCCGCTCCCCGGACCCGGTGGCGGTGACTCTTCCTCGTCGGCGGCGCTGGGACTCCTCCTCCAGTCGTCAAAATTACAAGACGTGTTAGAGAGAACGTCCGCCGCCGACGCTCCAGAGACGCCCCCGGAATCGGACCGGCCGCGCCGCTGCTTTCCAGACGACGTTCAAACTTACTTCGATTCTACTCAAGATTCCGGCGACTTTGCCGAAAGCGACGACGGCATTTTCGGGTACCTAAACTCGCTTTTTCCTTCCACGATTTTTCACTGCGAACTGGATGCTTAA | 1188 | 51.18 | CPLKLPFSIGRLSPFSSLSSLFLSLLLPAPSPSLLVLMGKISHPPHKNSISTTDNTHSTTPRHERKLQKRKRKTVPRDSPAQRSSVYRGVTRHRWTGRYEAHLWDKNCWNEGQNKKGRQGAYDDEAAAAHAYDLAALKYWGTETVLNFPLLTYQDELKEMEGQSREEYIGFLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKSLRPRQQQSIISNNRPPNPNAGELPALEFDPNSLLGFTFPSQCSSSGQPATAPLPGPGGGDSSSSAALGLLLQSSKLQDVLERTSAADAPETPPESDRPRRCFPDDVQTYFDSTQDSGDFAESDDGIFGYLNSLFPSTIFHCELDA | 395 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3560491 | 3565683 | - | MC09g0393 | Mch9g0483 | 697365 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g0483 | 395 | MobiDBLite | consensus disorder prediction | 45 | 87 | - | - | |
Mch9g0483 | 395 | PRINTS | Ethylene responsive element binding protein signature | 225 | 245 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0483 | 395 | PRINTS | Ethylene responsive element binding protein signature | 87 | 98 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0483 | 395 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 70 | 264 | - | - | |
Mch9g0483 | 395 | Gene3D | AP2/ERF domain | 86 | 151 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0483 | 395 | Gene3D | AP2/ERF domain | 184 | 245 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0483 | 395 | Pfam | AP2 domain | 184 | 235 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0483 | 395 | ProSiteProfiles | AP2/ERF domain profile. | 86 | 149 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0483 | 395 | FunFam | AP2-like ethylene-responsive transcription factor | 184 | 245 | - | - | |
Mch9g0483 | 395 | SUPERFAMILY | DNA-binding domain | 184 | 245 | IPR016177 | GO:0003677(InterPro) | |
Mch9g0483 | 395 | FunFam | AP2-like ethylene-responsive transcription factor | 85 | 151 | - | - | |
Mch9g0483 | 395 | MobiDBLite | consensus disorder prediction | 254 | 276 | - | - | |
Mch9g0483 | 395 | MobiDBLite | consensus disorder prediction | 289 | 314 | - | - | |
Mch9g0483 | 395 | CDD | AP2 | 184 | 245 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0483 | 395 | ProSiteProfiles | AP2/ERF domain profile. | 185 | 243 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0483 | 395 | MobiDBLite | consensus disorder prediction | 254 | 268 | - | - | |
Mch9g0483 | 395 | SUPERFAMILY | DNA-binding domain | 85 | 150 | IPR016177 | GO:0003677(InterPro) | |
Mch9g0483 | 395 | SMART | rav1_2 | 86 | 155 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0483 | 395 | SMART | rav1_2 | 185 | 249 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0483 | 395 | MobiDBLite | consensus disorder prediction | 330 | 351 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g0591 | Mch-Chr6:4024548 | Mch9g0483 | Mch-Chr9:3560491 | 1.90E-134 | dispersed | |
Mch8g1031 | Mch-Chr8:7280075 | Mch9g0483 | Mch-Chr9:3560491 | 4.11E-77 | dispersed | |
Mch8g2499 | Mch-Chr8:27903072 | Mch9g0483 | Mch-Chr9:3560491 | 8.54E-79 | dispersed | |
Mch9g0483 | Mch-Chr9:3560491 | Mch9g1891 | Mch-Chr9:20537313 | 2.43E-90 | dispersed | |
Mch9g0483 | Mch-Chr9:3560491 | Mch8g0606 | Mch-Chr8:4348038 | 1.15E-78 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44008 | PF00847 | AP2 | 1.40E-08 | CL0081 | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch9g0483 | K09285 | - | csv:101206499 | 526.554 |