Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0492 ATGGCCGTCGAATCCAACCAAACCCGCGAGTTCATCTTCCGTTCAAAACTTCCCGATATTTACATCCCCAACCACCTCCCACTCCACGATTACGTCTTCCAAAACAAGCCCAATTTGGGCTCACGGCCGTGCCTCATCAACGGCGCCACCGGCGACGTCTACTCATACGACGACGTTCACCTCACCGCCCGCCGCGTCGCCGCCGGGCTCCACAAGCTTGGCATCGGAAAGGGCGACGTCATCATGAACTTACTCCCCAATTCGCCGGAGTTTGTGTTCTCGTTTCTCGGCGCGTCGTATCGCGGCGCTGTTATGACGGCGGCGAACCCGTTCTACACGCCGGCGGAGATTGCCAAGCAGGCCAAGGCTTCCAATGCGAAGCTGATCGTTACGCAGGCTTGTTTTTACGATCGGGTTAAGGATTTGGGCGGCGTTAAAATCGTGTGTGTGGATTTTGCTCCGGAGGGGTGTTTGCATTTCTCTGTTTTGAGTCAGGCGGATGAGGACCACGCGCCTCCGGTGGAGATTGCCGGCGACGACGTGGTGGCGCTGCCGTACTCCTCCGGAACCACCGGGTTGCCGAAGGGGGTTATGTTGACGCATAAAGGACTCGTGACGAGTGTGGCTCAGCAAATCGACGGCGAGAATCCGAACCTCCATTACCACGCCGATGACGTGATCCTCTGCGTTTTGCCGTTTTTCCATATTTATTCTCTGAATTCGATTTTGCTGTGTGGGCTACGCGCCGGCGCCGCGATTTTGATAATGCAGAAATTCGAGATTGGTACTCTGCTCCAACTCGTTGAGAAATACAGAGTCTCGATCATGCCGATCGTGCCGCCGATTTTCTTGGCGATCGCGAAGTCGCCGGAGCTGGAGAATTACGATCTCTCCTCCGTGAGGGTTCTGAAATCCGGCGGAGCGCCGCTCGGGAAGGAGCTGGAAGACGCCGTGAGGGCGAAGTTTCCGGCGGCGGTTCTCGGGCAGGGGTACGGAATGACGGAGGCCGGTCCGGTTCTGACGATGAGTTTGGCTTTCGCGAAGCAGCCGTTTGCAGTGAAGGCCGGCGCTTGCGGGACGGTGGTGAGAAATGCGGAGATGAAAATCGTCGATCCCGAAACCGGCGCCTCCTTGCCGGCGAATTCCGCCGGAGAAATCTGCATCAGAGGAGACCAAATCATGAAGGGGTATTTGAATGACCCGGAGTCCACCAAGAGGACCATTGATAAAGAAGGATGGCTACACACCGGCGACATCGGCCTCATCGACGATGACGACGAGCTCTTCATCGTCGATCGGTTGAAAGAACTGATCAAATTTAAGGCATTTCAAGTGGCCCCGGCCGAGCTCGAGGCCCTTCTAATCACTCATCCTAAACTATCCGACGCTGCAGTTGTCGGTATGCCGGACGAGCAGGCCGGAGAGGTGCCGGTGGCATTTGCGGTGAAGGCGAACGGCGGCGCTGTGACGGAGGAAGAGGTGAAGCAATTCATAGCGAAGCAAGTGGTGTTCTACAAGAGGCTAAAACGGGTATTCTTCGTCAACGCCATTCCGAAGGCGCCATCTGGCAAGATCCTCAGGAAAGAGCTCAGAGCAAAACTTGCTTCTGGAGCTTACAATTAA 1623 56.07 MAVESNQTREFIFRSKLPDIYIPNHLPLHDYVFQNKPNLGSRPCLINGATGDVYSYDDVHLTARRVAAGLHKLGIGKGDVIMNLLPNSPEFVFSFLGASYRGAVMTAANPFYTPAEIAKQAKASNAKLIVTQACFYDRVKDLGGVKIVCVDFAPEGCLHFSVLSQADEDHAPPVEIAGDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQIDGENPNLHYHADDVILCVLPFFHIYSLNSILLCGLRAGAAILIMQKFEIGTLLQLVEKYRVSIMPIVPPIFLAIAKSPELENYDLSSVRVLKSGGAPLGKELEDAVRAKFPAAVLGQGYGMTEAGPVLTMSLAFAKQPFAVKAGACGTVVRNAEMKIVDPETGASLPANSAGEICIRGDQIMKGYLNDPESTKRTIDKEGWLHTGDIGLIDDDDELFIVDRLKELIKFKAFQVAPAELEALLITHPKLSDAAVVGMPDEQAGEVPVAFAVKANGGAVTEEEVKQFIAKQVVFYKRLKRVFFVNAIPKAPSGKILRKELRAKLASGAYN 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3635471 3637739 + MC09g0402 Mch9g0492 697374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0492 540 SUPERFAMILY Acetyl-CoA synthetase-like 10 536 - -
Mch9g0492 540 FunFam 4-coumarate--CoA ligase 2 436 537 - -
Mch9g0492 540 Pfam AMP-binding enzyme C-terminal domain 449 524 IPR025110 -
Mch9g0492 540 ProSitePatterns Putative AMP-binding domain signature. 184 195 IPR020845 -
Mch9g0492 540 Gene3D - 435 536 IPR045851 -
Mch9g0492 540 Gene3D - 6 434 IPR042099 -
Mch9g0492 540 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 531 - GO:0016405(PANTHER)
Mch9g0492 540 Pfam AMP-binding enzyme 41 398 IPR000873 -
Mch9g0492 540 CDD 4CL 22 530 - -
Mch9g0492 540 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1622 Mch-Chr2:13499053 Mch9g0492 Mch-Chr9:3635471 3.24E-239 dispersed
Mch8g2117 Mch-Chr8:24211515 Mch9g0492 Mch-Chr9:3635471 1.98E-19 dispersed
Mch8g2685 Mch-Chr8:30119516 Mch9g0492 Mch-Chr9:3635471 9.34E-264 dispersed
Mch9g0492 Mch-Chr9:3635471 Mch9g1823 Mch-Chr9:20021828 6.83E-114 dispersed
Mch9g2378 Mch-Chr9:23652413 Mch9g0492 Mch-Chr9:3635471 6.20E-137 transposed
Mch8g1049 Mch-Chr8:7367318 Mch9g0492 Mch-Chr9:3635471 1.92E-294 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0492 K01904 - csv:101218121 932.169