Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g0493 | ATGGGGACTCCGGTGAATATCATTGTCGGATCACATGTTTGGGTTGGGGATCCTGAGGATGCTTGGGTTGATGGTCAAGTTACAGAAATTAATGGCAAAAATGCCACCATAATCACCACCAATGAAAAAACTATTGTTGCAGAAATTTCGAGCATATATCCGAAAGACACGGAGGCGCCGCCGGCTGGGGTTGACGACATGACGAAATTGGCGTACCTCCATGAACCGGGAGTTCTGCACAATCTAGCTTGTCGGTTTTCTCTCAATGAGATATATACTTACACCGGGAACATTCTAATAGCGGTAAATCCTTTCCGGAGACTGCCTCATTTGTATGATATTCACATGATGGAACAGTACAAAGGAGCTGCTTTCGGCGAGCTTAGTCCACATCTTTTCGCTGTTGCAGATGCTTGCTACAGATCAATGATCAATGAGCAAGGAAGTCAATCCATTTTAGTGAGTGGAGAGAGTGGTGCTGGTAAAACTGAGACAACAAAGATGCTTATGAGATACCTTGCATTTATGGGAGGCAGATCAAATACTGAAGGAAGAACAGTCGAGCAACAGGTTTTGGAGTCCAACCCTGTACTAGAAGCATTTGGAAATGCCAAAACTGTCAAAAACAACAACTCAAGTCGTTTTGGTAAATTTGTAGAAATCCAATTTGATAAGAACTGGAAGATCTCCGGAGCTGCCATTCGAACATACCTTCTTGAACGGTCAAGAGTTTGCCAAGTCTCAGATCCTGAGAGGAACTACCATTGTTTTTATATGCTCTGCGCTGCACCACCAGAAGATGTCAAGAAATACAAGTTAGGAGACCCAAGGTCATTCCATTACCTTAACCAAACAAATTGTTATGAAGTTGCGAATGTTGATGATTCAAGAGAGTACTTGGAGACAAGAAATGCCATGGATGTTGTAGGAATCAGCCAGGATGAACAGGATGCTATATTTCGTGTTGTAGCTGCAATACTGCATCTTGGAAACATTGACTTCATGAAAGGGAAGGAAGTTGACTCCTCCAAAGTGAAAGATGAGAAATCAAATTATCATCTTCAAACAGCAGCAGAGCTACTCATGTGTGATGTAAAGGCACTGGAAGATTCCCTCTGCCAGCGTGTCATAGTGACACCTGATGGAAACATTACTAAGCCCCTGGACCCAGATTCAGCAGTCTTGAGTCGTGATGCATTGGCAAAAACTGTATATTCTAGGCTGTTTGATTGGATTGTGGACAAAATTAATAGTTCAATTGGCCAAGATCCTAATGCAGCGAGCTTAATTGGTGTCCTCGATATTTATGGATTTGAAAGCTTCAAGATCAACAGTTTTGAGCAGCTCTGTATCAACCTGACCAATGAGAAGCTGCAGCAGCATTTTAATCAGCATGTTTTTAAAATGGAGCAAGAGGAGTACACGAAGGAAGAAATAAACTGGAGCTATGTTGAGTTTGTAGATAATCAGGACGTCCTTGATCTTATCGAGAAGAAACCTGGAGGTATAATTGCCCTGCTTGATGAAGCCTGTATGTTCCCGAAGTCCACGCATGAAACATTTGCTCAAAAGATGTATCAGACATACAAAGCGCATAAGCGGTTCAGCAAGCCAAAACTTGCTCGAACAGATTTCACAATAAACCATTATGCTGGAGATGTTACATACCAAGCAGATCAATTTCTAGATAAAAACAAGGACTATGTTGTAGCAGAACATCAGGCTCTTCTGAATGCCTCACAATGCTCTTTTGTTGCCAATCTTTTCCCTCCACTTCCTGAGGAGAGCTCAAAGCAATCCAAGTTTTCCTCTATTGGTACTCGGTTCAAGCAACAACTACAAGCTCTCATGGAAACATTGAATACCACAGAACCACATTATATTAGATGTGTAAAACCCAACACAGTCTTGAAACCTGGAATCTTTGAGAACTTCAATGTGTTGAACCAATTGAGGTGTGGGGGAGTGCTCGAGGCGATTAGAATAAGCTGTGCAGGATATCCAACAAAAAGAACATTTGATGAGTTCCTTGATCGTTTTGGAATGCTTGCTCCAGATATTTTGGATGGATCTGATGAAAAATCACCCTGCATTGCAATATGCGACAGAATGGGCTTAAAGGGTTATCAGATTGGAAAAACGAAAGTGTTTCTTAGAGCTGGACAAATGGCTGAGTTGGATGCTCGACGAACTGAAATATTGGCCAATGCTGTCAGACGCATCCAACGGCAAATCCGTACCCATCTAACTAGAAAAGAGTTTATCTCCTTGAGGAGAGCTACAATTCATCTGCAGAAACTTTGGAGAGCACAACTTGCTCGTCAGCTGTATGAGCAGATGAGGAGAGAAGCAGCTTCAATCCGTATACAGAAGCATGCACGTGGTCACGCAGCTAGTAAATCTTACAAAAAGTTACTTGCATCTGCAATAGTTATTCAAACTGGTATGCGAGCAATGGCAGCAAGAAACGAATATAGACACAGAAGAAGAACAAAGGCAGCTATCATTGTTCAGACTGAATGGCGAAGGGCATCAGCTATTTCAGCTTACATACAGCAGCAGAAGGCAACTCTTTCTCTTCAATGCCTCTGGCGTGCTAGAATTGCAAGAAAGGAGCTTAAAAAATTAAAGATGGCGAAAACAGGGGCACTGAAGGAGGCTAAGGACAAATTGGAGAAGCGCGTCGAGGAGCTAACATGGCGCCTAGAATTTGAGAAGCACTTGAGGATGGATGTTGAAGAAGCCAAGGGGCAAGAGGTTGCAAAGTTACAAAGTGCTTTGGAAGAAATGCAAGGGCAGCTTGATGAAGCCAATGCTGCAATCATACGCGAGAGAGAAGCGGCAAAGTTGGCCATAGAACAAGCTCCACCAGTCATTAAGGAAGTACCTGTGGTTGATGAGACCAAGCTAAAATTACTGAGCAATCACAATGAAGAACTTGAGGTTGAGGTTGGAGAGCTGAAGAAGAAAATTGAGGAATTTGAAGAAAAGTTTGCTGAAGTGGAAAATGAGAGTAAAGCAAGACTCAAGGAGGCAGAAGAAGCTCAATTGAAAGCAATGCAACTTCAAGAGACTATTGAGAGATTGGAATTAAATTTGTCTAGCCTCGAGTCTGAGAACCAAGTTCTACGCCAGCAGGCTTTGGTTGCAGCAGACAATGAATCCCTCTCTGAAGAACTGCAAACCCTCAAGAGTAAAATTGGAAGTTTAGAGGCAGAGAATGAAGTTCTCCGGAACCGGCCAGTTGCTGTTGAGCATATGGCTACTCCTGCAGTGAGGCCTGCAGAAAGCACGACGTTAGATAATGGGCACCTAGTGGAAGAAGAGATTAAACCAACCAAGGAACCATCTATTGTTCCTGTTCTAGCTAAACAAGGCTCGCTCACAGAAAAGCAACAGGAAAATCATGATGTCCTGCTCAAGTGTCTGGCAGAAGACAAACGTTTTGACAAAGGCAGACCAGTTGCAGCTTGTATCGTCTACAAGACACTGCTTCAATGGCGATCTTTTGAGGCAGAAAAGACAAATTTATTTGACAGAATTATTCACACAATCAGATCTTCTATAGAGAATCAAGAAAATATCAGTGACCTTGCATATTGGCTTTCAACCACCTCTACCCTTCTCTATCTTCTTCAAAGTTCACTCAAGGCAACTAATACAAGTACTACAGCTTCACACCGGAACCGAACTTCCCCTGCATCCTTATTTGGTCGTATGGCATATGGTCTTCGATCAGCTTCGGTGGGTATGGGAATTTCCAGTGGATACAGTGGAATGGTGGGAAAGACAAACAATCAATCTAAAGTTGAAGCCAAATACCCAGCCCTGCTTTTTAAGCAACATCTGGCAGCTTGCATTGAAAAGTTGTTTGGGATGATACGCGATAATTTGAAGAAAGAAATTAGCCCTTTCTTGCATCTATGCATACAGGCACCAAGATCAGTGAGGGCCAGATCAATAAGAGGGTCATCTAAAAATATCCATTCAAATATTGTTGCAAAACAGCAAGCATCAAGTATTCACTGGCAAAGCATTGTTAATAAGCTAGATCAGACCTTGGATATAATGTCTGAAAACCATGTTCCCTCCATGATCATGAGAAAAATCTTCTTACAGGTTTTCTCATTCATAAATGTCCAGCTCTTCAATAGCTTGTTACTGCGACGTGAGTGCTGTTCCTTCAGTAATGGAGAGTACTTAAAGTTAGGACTGCAGGAGTTGGAGCAATGGTGTAACAAAGCTACTGATACATACTCTGGTTCTTCGTGGGATGAACTTCAACACATAAGACAAGCAGTAGGATTTCTGGTGTTACATCAGAAGTCCCAGAAAAGTTTGAATGAGATCACAGACGAATTGTGCCCGATACTGAGCATCCCACAAATCTATCGCATCGGAACGATGTTCTGGGACGACAAATATGGAACTCAGGGACTATCACCTGATCTAATTGGAAGAATGAGAGTCCTATTGGCAGAAGACTCAATCAACATCCCAAACAACTCTTTTCTCCTTGATGTGGATTCAAGCATACCATTTTCAATAGAAGAAATATTCCGGTCCTTTGGCGAGGTTAATCTGTCCGATGTCGACCCGCCACCGATTATAAGACAGAGATCAGATTTCCATTTTCTACTGCAGCAACTGACTGAATGA | 4659 | 42.39 | MGTPVNIIVGSHVWVGDPEDAWVDGQVTEINGKNATIITTNEKTIVAEISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAAFGELSPHLFAVADACYRSMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSNTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNWKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKYKLGDPRSFHYLNQTNCYEVANVDDSREYLETRNAMDVVGISQDEQDAIFRVVAAILHLGNIDFMKGKEVDSSKVKDEKSNYHLQTAAELLMCDVKALEDSLCQRVIVTPDGNITKPLDPDSAVLSRDALAKTVYSRLFDWIVDKINSSIGQDPNAASLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFSKPKLARTDFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNASQCSFVANLFPPLPEESSKQSKFSSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDILDGSDEKSPCIAICDRMGLKGYQIGKTKVFLRAGQMAELDARRTEILANAVRRIQRQIRTHLTRKEFISLRRATIHLQKLWRAQLARQLYEQMRREAASIRIQKHARGHAASKSYKKLLASAIVIQTGMRAMAARNEYRHRRRTKAAIIVQTEWRRASAISAYIQQQKATLSLQCLWRARIARKELKKLKMAKTGALKEAKDKLEKRVEELTWRLEFEKHLRMDVEEAKGQEVAKLQSALEEMQGQLDEANAAIIREREAAKLAIEQAPPVIKEVPVVDETKLKLLSNHNEELEVEVGELKKKIEEFEEKFAEVENESKARLKEAEEAQLKAMQLQETIERLELNLSSLESENQVLRQQALVAADNESLSEELQTLKSKIGSLEAENEVLRNRPVAVEHMATPAVRPAESTTLDNGHLVEEEIKPTKEPSIVPVLAKQGSLTEKQQENHDVLLKCLAEDKRFDKGRPVAACIVYKTLLQWRSFEAEKTNLFDRIIHTIRSSIENQENISDLAYWLSTTSTLLYLLQSSLKATNTSTTASHRNRTSPASLFGRMAYGLRSASVGMGISSGYSGMVGKTNNQSKVEAKYPALLFKQHLAACIEKLFGMIRDNLKKEISPFLHLCIQAPRSVRARSIRGSSKNIHSNIVAKQQASSIHWQSIVNKLDQTLDIMSENHVPSMIMRKIFLQVFSFINVQLFNSLLLRRECCSFSNGEYLKLGLQELEQWCNKATDTYSGSSWDELQHIRQAVGFLVLHQKSQKSLNEITDELCPILSIPQIYRIGTMFWDDKYGTQGLSPDLIGRMRVLLAEDSINIPNNSFLLDVDSSIPFSIEEIFRSFGEVNLSDVDPPPIIRQRSDFHFLLQQLTE | 1552 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 3645648 | 3657011 | + | MC09g0403 | Mch9g0493 | 697375 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g0493 | 1552 | FunFam | unconventional myosin-Va | 833 | 880 | - | - | |
| Mch9g0493 | 1552 | Coils | Coil | 970 | 1046 | - | - | |
| Mch9g0493 | 1552 | Gene3D | - | 439 | 623 | - | - | |
| Mch9g0493 | 1552 | ProSiteProfiles | Dilute domain profile. | 1179 | 1494 | IPR002710 | - | |
| Mch9g0493 | 1552 | FunFam | unconventional myosin-Va | 736 | 784 | - | - | |
| Mch9g0493 | 1552 | Pfam | IQ calmodulin-binding motif | 758 | 777 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0493 | 1552 | Pfam | IQ calmodulin-binding motif | 737 | 754 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0493 | 1552 | Pfam | IQ calmodulin-binding motif | 855 | 874 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0493 | 1552 | Pfam | IQ calmodulin-binding motif | 807 | 826 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0493 | 1552 | Pfam | IQ calmodulin-binding motif | 784 | 803 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0493 | 1552 | ProSiteProfiles | IQ motif profile. | 853 | 882 | - | - | |
| Mch9g0493 | 1552 | SMART | MYSc_2a | 56 | 732 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0493 | 1552 | Gene3D | - | 667 | 729 | - | - | |
| Mch9g0493 | 1552 | Coils | Coil | 1053 | 1080 | - | - | |
| Mch9g0493 | 1552 | SMART | iq_5 | 829 | 851 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0493 | 1552 | SMART | iq_5 | 804 | 826 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0493 | 1552 | SMART | iq_5 | 733 | 755 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0493 | 1552 | SMART | iq_5 | 756 | 778 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0493 | 1552 | SMART | iq_5 | 781 | 803 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0493 | 1552 | SMART | iq_5 | 852 | 874 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0493 | 1552 | Pfam | DIL domain | 1370 | 1473 | IPR002710 | - | |
| Mch9g0493 | 1552 | CDD | MYSc_Myo11 | 76 | 719 | IPR036018 | - | |
| Mch9g0493 | 1552 | ProSiteProfiles | Myosin motor domain profile. | 62 | 731 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0493 | 1552 | CDD | MyosinXI_CBD | 1130 | 1517 | IPR037975 | GO:0007015(InterPro) | |
| Mch9g0493 | 1552 | ProSiteProfiles | IQ motif profile. | 805 | 834 | - | - | |
| Mch9g0493 | 1552 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0493 | 1552 | Gene3D | Kinesin motor domain | 65 | 662 | IPR036961 | - | |
| Mch9g0493 | 1552 | ProSiteProfiles | IQ motif profile. | 734 | 761 | - | - | |
| Mch9g0493 | 1552 | Pfam | Myosin N-terminal SH3-like domain | 9 | 47 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0493 | 1552 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0493 | 1552 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0493 | 1552 | PRINTS | Myosin heavy chain signature | 429 | 457 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0493 | 1552 | PRINTS | Myosin heavy chain signature | 196 | 223 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0493 | 1552 | PRINTS | Myosin heavy chain signature | 482 | 510 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0493 | 1552 | FunFam | Myosin 2 | 312 | 427 | - | - | |
| Mch9g0493 | 1552 | PANTHER | MYOSIN | 12 | 1491 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Mch9g0493 | 1552 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 312 | 601 | - | - | |
| Mch9g0493 | 1552 | Pfam | Myosin head (motor domain) | 64 | 719 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0493 | 1552 | FunFam | Class V myosin | 439 | 586 | - | - | |
| Mch9g0493 | 1552 | SMART | DIL_2 | 1369 | 1476 | IPR002710 | - | |
| Mch9g0493 | 1552 | Coils | Coil | 881 | 908 | - | - | |
| Mch9g0493 | 1552 | ProSiteProfiles | IQ motif profile. | 757 | 786 | - | - | |
| Mch9g0493 | 1552 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 785 | 879 | IPR027417 | - | |
| Mch9g0493 | 1552 | Gene3D | - | 833 | 881 | - | - | |
| Mch9g0493 | 1552 | Gene3D | - | 785 | 832 | - | - | |
| Mch9g0493 | 1552 | Gene3D | - | 733 | 784 | - | - | |
| Mch9g0493 | 1552 | Coils | Coil | 920 | 947 | - | - | |
| Mch9g0493 | 1552 | ProSiteProfiles | IQ motif profile. | 782 | 808 | - | - | |
| Mch9g0493 | 1552 | FunFam | Myosin heavy chain | 252 | 307 | - | - | |
| Mch9g0493 | 1552 | Gene3D | - | 252 | 310 | - | - | |
| Mch9g0493 | 1552 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 35 | 785 | IPR027417 | - | |
| Mch9g0493 | 1552 | FunFam | unconventional myosin-Va | 785 | 832 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch8g2972 | Mch-Chr8:32397966 | Mch9g0493 | Mch-Chr9:3645648 | 0 | dispersed | |
| Mch9g0029 | Mch-Chr9:253968 | Mch9g0493 | Mch-Chr9:3645648 | 0 | dispersed | |
| Mch9g0493 | Mch-Chr9:3645648 | Mch9g0990 | Mch-Chr9:8383091 | 0 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch9g0493 | K10357 | - | csv:101207221 | 2829.66 |