Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g0550 | GCCCCTCTAAGTCTCCGCCTAAAATATTCGCTCCTCTTCCTTCCAACGCGACATTGTAGGCGCTGCGGACTCCTCCAACAATCCCTCGCGGCCATCAGTTTTCTCCAAGGGGAAGAAGTAGCTATGGCTGATCAGGTTCAACATCCTACCGTCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTTCTCAAGGTTTCCGTGCCTGTGATGATGGCTTTAGTAACCCTGCTCTTTATCAGAGACGTGCATCAATCAGAAACTATACAAATGCTGGATTTCAATATCCTGCTGTGCAATCCTGTGTTGCTACAACTGATCTTTCAAGAGTTGCCTCAACTGCCTCCCCCATTTTTGTTGCTGCACCTGCTGAGAAAGGAAATTTTATGATTGACTTTCTTATGGGTGGGGTCTCAGCGGCTGTATCCAAGACTGCTGCAGCTCCAATTGAGCGTGTCAAACTCTTAATCCAAAATCAGGATGAGATGATTAAAGCTGGACGGCTGTCTGAGCCATACAAGGGTATTGGTGACTGTTTCAAACGTACAATACAAGAGGAGGGTTTTGGTTCATTGTGGAGGGGAAACACTGCCAATGTTATTCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAAAGACTCTTCAATTTCAAGAAGGACAAAGATGGTTACTGGAAATGGTTTGCTGGTAACTTGGCATCAGGTGGTGCAGCTGGTGCTTCATCCCTTCTGTTTGTCTACTCTCTCGACTATGCTCGTACCCGGTTGGCAAACGACGCCAAAGCTGCCAAGAAAGGTGGCGAAAGGCAATTCAATGGACTGGTTGATGTCTACAGGAAGACATTGCAGTCTGATGGTATCGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATTGTGTACCGTGGTTTGTACTTCGGAATGTACGATTCTCTGAAGCCTGTTTTATTGACTGGGAAGATGCAGGATAGCTTCTTTGCTAGCTTTGCCCTCGGGTGGCTGATCACCAATGGTGCTGGGCTTGCATCCTACCCAATCGACACCGTTCGTAGAAGAATGATGATGACTTCCGGTGAAGCAGTTAAGTACAAGAGCTCAATGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTGTTCAAGGGTGCCGGTGCCAACATCCTCCGTGCCGTGGCCGGTGCTGGTGTGCTCGCCGGGTACGATAAGTTGCAGGTGATCGTTTTCGGGAAGAAATATGGATCTGGTGGTGCTTAA | 1296 | 47.53 | APLSLRLKYSLLFLPTRHCRRCGLLQQSLAAISFLQGEEVAMADQVQHPTVYQKVAGQLSLQSRVSQGFRACDDGFSNPALYQRRASIRNYTNAGFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA | 431 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 4019635 | 4022401 | + | MC09g0451 | Mch9g0550 | 697432 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g0550 | 431 | Gene3D | Mitochondrial carrier domain | 132 | 427 | IPR023395 | - | |
| Mch9g0550 | 431 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 234 | 326 | IPR018108 | - | |
| Mch9g0550 | 431 | FunFam | ADP,ATP carrier protein, mitochondrial | 132 | 427 | - | - | |
| Mch9g0550 | 431 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 127 | 428 | IPR002113 | GO:0005471(PANTHER)|GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Mch9g0550 | 431 | Pfam | Mitochondrial carrier protein | 334 | 422 | IPR018108 | - | |
| Mch9g0550 | 431 | Pfam | Mitochondrial carrier protein | 129 | 226 | IPR018108 | - | |
| Mch9g0550 | 431 | Pfam | Mitochondrial carrier protein | 234 | 328 | IPR018108 | - | |
| Mch9g0550 | 431 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 334 | 420 | IPR018108 | - | |
| Mch9g0550 | 431 | SUPERFAMILY | Mitochondrial carrier | 129 | 416 | IPR023395 | - | |
| Mch9g0550 | 431 | PRINTS | Mitochondrial carrier protein signature | 249 | 267 | IPR002067 | GO:0055085(InterPro) | |
| Mch9g0550 | 431 | PRINTS | Mitochondrial carrier protein signature | 197 | 217 | IPR002067 | GO:0055085(InterPro) | |
| Mch9g0550 | 431 | PRINTS | Mitochondrial carrier protein signature | 147 | 161 | IPR002067 | GO:0055085(InterPro) | |
| Mch9g0550 | 431 | PRINTS | Mitochondrial carrier protein signature | 134 | 147 | IPR002067 | GO:0055085(InterPro) | |
| Mch9g0550 | 431 | PRINTS | Mitochondrial carrier protein signature | 299 | 317 | IPR002067 | GO:0055085(InterPro) | |
| Mch9g0550 | 431 | PRINTS | Mitochondrial carrier protein signature | 343 | 365 | IPR002067 | GO:0055085(InterPro) | |
| Mch9g0550 | 431 | PRINTS | Adenine nucleotide translocator signature | 208 | 220 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Mch9g0550 | 431 | PRINTS | Adenine nucleotide translocator signature | 175 | 196 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Mch9g0550 | 431 | PRINTS | Adenine nucleotide translocator signature | 234 | 247 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Mch9g0550 | 431 | PRINTS | Adenine nucleotide translocator signature | 339 | 355 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Mch9g0550 | 431 | PRINTS | Adenine nucleotide translocator signature | 131 | 143 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Mch9g0550 | 431 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 129 | 222 | IPR018108 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch9g0549 | Mch-Chr9:4015116 | Mch9g0550 | Mch-Chr9:4019635 | 2.59E-280 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch9g0550 | K05863 | - | csv:101203733 | 734.947 |