Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g0612 | ATGGGATGCTTTGGTTGCTGCGAAGAAGATGCTATCCAGAAGGCCGCTGATGACAGCAGAATGTACCCAGTTAAAAGTTCATTAGGAACTGATGAAAGCTATCACAAATGGCAAGCTGCACCTAAGAGTCCTCCAATAGTGAAAATGCGGCCAATTGAGGTCCCTGCCATATCATTTCAGGAACTAAAGGAGGTTACAAAAAATTTTGATGCAGACAGTTTGATTGGAGAGGGTTCCTACGGTAGAGTATACTATGGGGTATTTACAAATGGGCAGTCTGTGGCAATCAAAAAGTTAGATTCCAGCAAACAACCTGATGATGAATTCTTATCCCAGGTTTCCATGGTTTCAAGACTAAAGCACAATAATTTTCTAAATTTGATTGGGTACTGTGTTGATGGCAATTCTCGAATTCTTGCATATGAGTATGCTTCAAGTGGATCTCTTCACGACATTTTACACGGGAGGAAAGGAGTCAAAGGAGCACAGCCTGGTCCTGTTCTTTCCTGGGCACAGAGAGTAAAAATTGCTGTAGGGGCTGCAAAGGGGTTGGAGTATTTACATGAAAAGGCTGATCCTCATATCATCCATCGGGACATAAAATTGAGCAACGTTCTAATATTTGATGATGATGTTGCAAAAATTGCTGACTTTGATTTGTCAAACCAAGCCCCTGATATGGCTGCACGGCTTCATTCCACTCGTGTTCTTGGAACCTTTGGTTATCATGCTCCCGAGTACGCAATGACTGGACAATTGAATGCCAAGAGTGATGTGTACAGTTTTGGTGTTGTCCTGCTTGAACTTTTGACAGGAAGAAAGCCAGTTGATCATACATTACCTCGAGGACAGCAAAGCCTCGTGACATGGGCAACGCCCAAACTTTGCGAGGATAAAGTCAGGCAGTGTGTTGATGCAAAACTAGGAGATGAGTACCCTCCCAAGGCAGTTGCTAAGTTTGCGGCCGTTGCAGCATTGTGCGTTCAATACGAGGCAGATTTCAGGCCAAACATGAGTATTGTAGTCAAAGCTCTGCAGCCTCTGTTAAATGCCCGACCTGGTCCTGGTGGTGAAGCACCATAA | 1083 | 44.14 | MGCFGCCEEDAIQKAADDSRMYPVKSSLGTDESYHKWQAAPKSPPIVKMRPIEVPAISFQELKEVTKNFDADSLIGEGSYGRVYYGVFTNGQSVAIKKLDSSKQPDDEFLSQVSMVSRLKHNNFLNLIGYCVDGNSRILAYEYASSGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKADPHIIHRDIKLSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLCEDKVRQCVDAKLGDEYPPKAVAKFAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPGGEAP | 360 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4570580 | 4575222 | - | MC09g0501 | Mch9g0612 | 697494 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g0612 | 360 | Gene3D | Transferase(Phosphotransferase) domain 1 | 145 | 353 | - | - | |
Mch9g0612 | 360 | PIRSF | ILK | 12 | 352 | - | - | |
Mch9g0612 | 360 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 195 | 207 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch9g0612 | 360 | SMART | serkin_6 | 69 | 349 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g0612 | 360 | Gene3D | Phosphorylase Kinase; domain 1 | 33 | 143 | - | - | |
Mch9g0612 | 360 | Pfam | Protein tyrosine and serine/threonine kinase | 72 | 345 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch9g0612 | 360 | PANTHER | PTO-INTERACTING PROTEIN 1-LIKE | 3 | 351 | IPR052101 | - | |
Mch9g0612 | 360 | ProSiteProfiles | Protein kinase domain profile. | 69 | 349 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g0612 | 360 | FunFam | PTI1-like tyrosine-protein kinase 3 | 33 | 143 | - | - | |
Mch9g0612 | 360 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 98 | IPR017441 | GO:0005524(InterPro) | |
Mch9g0612 | 360 | SUPERFAMILY | Protein kinase-like (PK-like) | 45 | 345 | IPR011009 | - | |
Mch9g0612 | 360 | FunFam | pto-interacting protein 1 | 145 | 356 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch7g0189 | Mch-Chr7:2338368 | Mch9g0612 | Mch-Chr9:4570580 | 1.09E-168 | dispersed | |
Mch9g0612 | Mch-Chr9:4570580 | Mch8g2131 | Mch-Chr8:24431334 | 2.50E-88 | dispersed | |
Mch8g2096 | Mch-Chr8:23979286 | Mch9g0612 | Mch-Chr9:4570580 | 2.01E-216 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77685 | PF07714 | PK_Tyr_Ser-Thr | 1.20E-45 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch9g0612 | K13436 | - | csv:101215263 | 655.21 |