Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0612 ATGGGATGCTTTGGTTGCTGCGAAGAAGATGCTATCCAGAAGGCCGCTGATGACAGCAGAATGTACCCAGTTAAAAGTTCATTAGGAACTGATGAAAGCTATCACAAATGGCAAGCTGCACCTAAGAGTCCTCCAATAGTGAAAATGCGGCCAATTGAGGTCCCTGCCATATCATTTCAGGAACTAAAGGAGGTTACAAAAAATTTTGATGCAGACAGTTTGATTGGAGAGGGTTCCTACGGTAGAGTATACTATGGGGTATTTACAAATGGGCAGTCTGTGGCAATCAAAAAGTTAGATTCCAGCAAACAACCTGATGATGAATTCTTATCCCAGGTTTCCATGGTTTCAAGACTAAAGCACAATAATTTTCTAAATTTGATTGGGTACTGTGTTGATGGCAATTCTCGAATTCTTGCATATGAGTATGCTTCAAGTGGATCTCTTCACGACATTTTACACGGGAGGAAAGGAGTCAAAGGAGCACAGCCTGGTCCTGTTCTTTCCTGGGCACAGAGAGTAAAAATTGCTGTAGGGGCTGCAAAGGGGTTGGAGTATTTACATGAAAAGGCTGATCCTCATATCATCCATCGGGACATAAAATTGAGCAACGTTCTAATATTTGATGATGATGTTGCAAAAATTGCTGACTTTGATTTGTCAAACCAAGCCCCTGATATGGCTGCACGGCTTCATTCCACTCGTGTTCTTGGAACCTTTGGTTATCATGCTCCCGAGTACGCAATGACTGGACAATTGAATGCCAAGAGTGATGTGTACAGTTTTGGTGTTGTCCTGCTTGAACTTTTGACAGGAAGAAAGCCAGTTGATCATACATTACCTCGAGGACAGCAAAGCCTCGTGACATGGGCAACGCCCAAACTTTGCGAGGATAAAGTCAGGCAGTGTGTTGATGCAAAACTAGGAGATGAGTACCCTCCCAAGGCAGTTGCTAAGTTTGCGGCCGTTGCAGCATTGTGCGTTCAATACGAGGCAGATTTCAGGCCAAACATGAGTATTGTAGTCAAAGCTCTGCAGCCTCTGTTAAATGCCCGACCTGGTCCTGGTGGTGAAGCACCATAA 1083 44.14 MGCFGCCEEDAIQKAADDSRMYPVKSSLGTDESYHKWQAAPKSPPIVKMRPIEVPAISFQELKEVTKNFDADSLIGEGSYGRVYYGVFTNGQSVAIKKLDSSKQPDDEFLSQVSMVSRLKHNNFLNLIGYCVDGNSRILAYEYASSGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKADPHIIHRDIKLSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLCEDKVRQCVDAKLGDEYPPKAVAKFAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPGGEAP 360
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 4570580 4575222 - MC09g0501 Mch9g0612 697494
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0612 360 Gene3D Transferase(Phosphotransferase) domain 1 145 353 - -
Mch9g0612 360 PIRSF ILK 12 352 - -
Mch9g0612 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0612 360 SMART serkin_6 69 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0612 360 Gene3D Phosphorylase Kinase; domain 1 33 143 - -
Mch9g0612 360 Pfam Protein tyrosine and serine/threonine kinase 72 345 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0612 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 3 351 IPR052101 -
Mch9g0612 360 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0612 360 FunFam PTI1-like tyrosine-protein kinase 3 33 143 - -
Mch9g0612 360 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524(InterPro)
Mch9g0612 360 SUPERFAMILY Protein kinase-like (PK-like) 45 345 IPR011009 -
Mch9g0612 360 FunFam pto-interacting protein 1 145 356 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch7g0189 Mch-Chr7:2338368 Mch9g0612 Mch-Chr9:4570580 1.09E-168 dispersed
Mch9g0612 Mch-Chr9:4570580 Mch8g2131 Mch-Chr8:24431334 2.50E-88 dispersed
Mch8g2096 Mch-Chr8:23979286 Mch9g0612 Mch-Chr9:4570580 2.01E-216 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77685 PF07714 PK_Tyr_Ser-Thr 1.20E-45 CL0016 Mch PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0612 K13436 - csv:101215263 655.21