Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0620 AAGATTTTTTGGTGGACAATTTTTGTGATAGGTTGGATTGTCATTATTTCTAAAGCTGAGGAAGAGTTGAGTGTGGGATTCTATAGTAAGACATGCCCTTCTGCAGAACGAATTGTGAGAACTTCTGTTGCAAAAGCTGTAGCTCAAGATCCTGGCCAAGCTGCTGGCATCATTCGATTGCATTTTCATGATTGCATTGTTGGGGGTTGCGACGGTTCTATACTTCTAGACTCGACACCAGAGAATCCTGAATCCGAGAAAGACAGTCCTAGCAACCCTTTATTGCGTGGCTTCGAAATCATCGATGATGCCAAAGCTCAGATCGAAGCTCGATGTCCCCAAACAGTTTCCTGCGCCGATATCTTAGCCTTCGCAGCTCGCGACAGCGTAGCCACTGTTGGCCAATTCACCTACGCTGTGCCAGGCGGCCGCCGCGACTCACTTGTCTCCCATGGCCCAAACGTTTCCGACAACGTCCCTTTCCCGACATCCGACATCGAATTTCTCAAACAACACTTCCAAGAACGAGGGTTGTCCCTAAGAGACATGGTGGCTCTCTCCGGCGCCCACTCCATCGGCGTTGCCCCTTGCGCGGCCTTCTCCGGCCGCCTCTTCTTCTTCAACGGCACAGAGAACAGCACTGACCCATCAATGGATCCAAAATTTGCGGAGTTTTTGAAAACCAAGTGCCCGGAGGAAGATGGTGGGTTGAGCAGAACGGCGGATCTGGACAACGTGACGCCGAATCAGCTCGACGTTCAGTTTTTCGAGAATTTGAAGAACAAGATGGGGGTTTTGTCGTCGGATCAGGCGCTGGCGAGTGACCCTCTGACGGCGGCGACGGTGAGGAGATACCGGAGAAATAGGGCGGTGTGGATGAGAGATTTCTCGGCGGCGATGGTGAAGATGGGGAAGCTGCAGGTTTTGACTGGAACTCAAGGGGAGATAAGAAGGAACTGCCATGTTCGGAAC 972 51.65 KIFWWTIFVIGWIVIISKAEEELSVGFYSKTCPSAERIVRTSVAKAVAQDPGQAAGIIRLHFHDCIVGGCDGSILLDSTPENPESEKDSPSNPLLRGFEIIDDAKAQIEARCPQTVSCADILAFAARDSVATVGQFTYAVPGGRRDSLVSHGPNVSDNVPFPTSDIEFLKQHFQERGLSLRDMVALSGAHSIGVAPCAAFSGRLFFFNGTENSTDPSMDPKFAEFLKTKCPEEDGGLSRTADLDNVTPNQLDVQFFENLKNKMGVLSSDQALASDPLTAATVRRYRRNRAVWMRDFSAAMVKMGKLQVLTGTQGEIRRNCHVRN 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4637878 4645473 - MC09g0509 Mch9g0620 697502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0620 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 PANTHER PEROXIDASE 25-RELATED 17 320 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Mch9g0620 324 Pfam Peroxidase 39 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 FunFam Peroxidase 160 303 - -
Mch9g0620 324 Gene3D - 26 324 - -
Mch9g0620 324 FunFam Peroxidase 26 167 - -
Mch9g0620 324 SUPERFAMILY Heme-dependent peroxidases 23 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 CDD secretory_peroxidase 22 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch9g0620 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Mch9g0620 324 ProSiteProfiles Plant heme peroxidase family profile. 22 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601(InterPro)
Mch9g0620 324 Gene3D Peroxidase, domain 2 160 303 - -
Mch9g0620 324 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch9g0620 324 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1308 Mch-Chr3:15935545 Mch9g0620 Mch-Chr9:4637878 1.30E-81 dispersed
Mch6g2632 Mch-Chr6:28090963 Mch9g0620 Mch-Chr9:4637878 1.51E-70 dispersed
Mch7g1130 Mch-Chr7:15199079 Mch9g0620 Mch-Chr9:4637878 2.21E-75 dispersed
Mch8g1566 Mch-Chr8:12443056 Mch9g0620 Mch-Chr9:4637878 4.71E-69 dispersed
Mch9g0618 Mch-Chr9:4617641 Mch9g0620 Mch-Chr9:4637878 5.04E-82 dispersed
Mch9g0620 Mch-Chr9:4637878 Mch9g2277 Mch-Chr9:23025538 2.29E-82 dispersed
Mch9g0619 Mch-Chr9:4634424 Mch9g0620 Mch-Chr9:4637878 1.51E-163 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0620 K00430 - csv:101216219 472.626