Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0624 ATGGTAGCAGAAGCTGAGGTTGTTGTTTGCCCGAAGAGCCTCCCGGTTTTGGAGGTGCAGTATTTCGATCAAATTGAGTCGATCGGCGACGCGATTTCGCCGACTCTCGACCGAGTTCGAGCTTCGGAATCGGTCTCCGCCGAGTTGTCTAGCTCTCAATCGGATATTAAACCCATGAAGAAAATTCCGGACTCCGACGACGGTTCGGCCGGCGTTGAGGAATTTCTTCCGAGCCTCCGGTCGGGGAGCTTTGCTGATATTGGACCTAGGAGATACATGGAAGATGAACATGTAAGGATAGATGATCTGTCTTCTCATTTAGGATCCTCGGTCTTCACGTTTCCCAAGCCAAGTGCTTTCTATGCGGTATTTGATGGCCATGGAGGACCTGAAGCAGCAGCTTATATCAGAAAGAATGTTCTAAGACTATTCTTTGAGGATGTTAGGTTTCCTCTAATGCCAGATGTTGATGAAGTCTTGCCGGAGGACATCGAAAACTTTCTTCGCGAAGCGTTTCTTCTGGCTGATCAAGCTCTGGCAGATGATTCTGATGTCAGTAGTTCTTCCGGGACGACGGCGCTGACTGCTCTGATACTTGGAAGGCTTTTAATGGTGGCTAACGTAGGAGATTGCCGGGCAGTTCTCTCTCGGAAAGGAGAGGCGGTAGATATGTCTCAAGACCACCGGCCAATTTATACCTCGGAGAGGCAACGGGTGGAAGAGTTGGGTGGCTACGTTGATGGCGGCTATCTTAACGGCGTTTTATCGGTATCCAGGGCCTTGGGGGATTGGGACATGAAGCTCCCCCATGGTTCTCCTTCACCTCTCATTGCAGAACCAGAATGCAGGCAGGTGGTTTTAACAGAGGAGGATGAGTTCCTGATCATAGCCTGCGATGGGATCTGGGACGTGATGTCTAGCCAGCAAGCAGTCAATGTGGTTCGACAGGGACTTCAGCGACACGACGACCCTGAGCGATGTGCTCGAGACCTCGTCCTGCAGGCTTTGCGACTAGACTCATTCGATAATCTCACTGTTGTCGTTGTTTGCTTCTCTAGTTTCCACCGTGACAATCCGTTGCCACTGCAGCGAAAATTGAGATACTGCAGCCTCTCTGCACAGGCCCTTTGTAGCTTGCAGAGATGGTTAGACAACAGTGGATGCCAATGA 1170 50.68 MVAEAEVVVCPKSLPVLEVQYFDQIESIGDAISPTLDRVRASESVSAELSSSQSDIKPMKKIPDSDDGSAGVEEFLPSLRSGSFADIGPRRYMEDEHVRIDDLSSHLGSSVFTFPKPSAFYAVFDGHGGPEAAAYIRKNVLRLFFEDVRFPLMPDVDEVLPEDIENFLREAFLLADQALADDSDVSSSSGTTALTALILGRLLMVANVGDCRAVLSRKGEAVDMSQDHRPIYTSERQRVEELGGYVDGGYLNGVLSVSRALGDWDMKLPHGSPSPLIAEPECRQVVLTEEDEFLIIACDGIWDVMSSQQAVNVVRQGLQRHDDPERCARDLVLQALRLDSFDNLTVVVVCFSSFHRDNPLPLQRKLRYCSLSAQALCSLQRWLDNSGCQ 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4663637 4666562 - MC09g0513 Mch9g0624 697506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0624 389 SUPERFAMILY PP2C-like 74 353 IPR036457 -
Mch9g0624 389 SMART PP2C_SIG_2 95 351 IPR001932 -
Mch9g0624 389 PANTHER PROTEIN PHOSPHATASE 2C 59 351 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Mch9g0624 389 SMART PP2C_4 70 349 IPR001932 -
Mch9g0624 389 MobiDBLite consensus disorder prediction 47 68 - -
Mch9g0624 389 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169(InterPro)
Mch9g0624 389 Gene3D - 63 357 IPR036457 -
Mch9g0624 389 FunFam Probable protein phosphatase 2C 22 65 354 - -
Mch9g0624 389 CDD PP2Cc 80 351 IPR001932 -
Mch9g0624 389 Pfam Protein phosphatase 2C 90 343 IPR001932 -
Mch9g0624 389 ProSiteProfiles PPM-type phosphatase domain profile. 80 351 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0044 Mch-Chr11:286097 Mch9g0624 Mch-Chr9:4663637 2.40E-104 dispersed
Mch11g0493 Mch-Chr11:3129560 Mch9g0624 Mch-Chr9:4663637 1.91E-35 dispersed
Mch7g0941 Mch-Chr7:13841548 Mch9g0624 Mch-Chr9:4663637 4.00E-06 dispersed
Mch7g1263 Mch-Chr7:16115789 Mch9g0624 Mch-Chr9:4663637 7.90E-133 dispersed
Mch8g2798 Mch-Chr8:30983631 Mch9g0624 Mch-Chr9:4663637 7.13E-18 dispersed
Mch9g0471 Mch-Chr9:3484858 Mch9g0624 Mch-Chr9:4663637 9.26E-36 dispersed
Mch9g0624 Mch-Chr9:4663637 Mch9g1452 Mch-Chr9:16876043 3.89E-36 dispersed
Mch9g0624 Mch-Chr9:4663637 Mch8g3003 Mch-Chr8:32638254 1.90E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0624 K14803 - csv:101216626 611.683