Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g0642 | ATGGAGGACGTGGCGGCAGCCGATTCGTTGAGATGCCCATTTTCCGATGCCTTCGAATTCGTCGACGGAAATGGTCGGCTAGAATTTATGGATCTTCTTGGAGTTCAAGACTTTTCGTCTCAATTATCGTCTTCTCTTATCGTTCCAAATCTTGAGGCAAACTCCATCATAGAGAATCTCGAGATTTGGAACCGTTGGCCCGCAACGTCGAATTCATCATCGACATCTAATGAAACTGTCAACGACGAACTGACAGAGCAGAATCAAGATGGAGGCGAAAAACGTCGCCTACCAGAATCCGTGAAATCTGACCAACGGTCGAAAGTAATGAAGACGAACCAGAAGAAGAAAGAGCAAGAACCACGATTTGCGTTTATGACAAAGAGCGAGGTCGATCACTTGGAAGATGGATATAGATGGAGAAAGTATGGCCAAAAAGCTGTGAAAAACAGCCCTTATCCTAGGAGCTATTATCGTTGCACTAGTGTGGCATGCAATGTAAAGAAACGAGTGGAGAGATGTCTTAAGGATCCGAGCATTGTGGTGACAACCTACGAAGGCCAACACACTCACCCCAGCCCTCTCATGCCCCGATCAACCTTCATTCATCACCCCATTTCTGCCGCCACCGCCCTCCATGGTAGCTCCACAACGTTCGCCACCACGCCCCCGTCTCTCTTCCACTACCGAAATGCACACAATTGGGATTTTGTTGGCCACCCGAACGCTTCCTATGTGTCACCTTCGTTTCATCAGGAGCGACAACTGCATGACATTGTCTCCTCTGAACAAGATGCTCATTTGCTTGCTATCAATTATGGGTCGCTTCAGGATGTCATCTCTTCCAATACGTTAGGCTGGTAG | 864 | 47.8 | MEDVAAADSLRCPFSDAFEFVDGNGRLEFMDLLGVQDFSSQLSSSLIVPNLEANSIIENLEIWNRWPATSNSSSTSNETVNDELTEQNQDGGEKRRLPESVKSDQRSKVMKTNQKKKEQEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSVACNVKKRVERCLKDPSIVVTTYEGQHTHPSPLMPRSTFIHHPISAATALHGSSTTFATTPPSLFHYRNAHNWDFVGHPNASYVSPSFHQERQLHDIVSSEQDAHLLAINYGSLQDVISSNTLGW | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4818780 | 4821015 | - | MC09g0530 | Mch9g0642 | 697524 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g0642 | 287 | Gene3D | WRKY domain | 105 | 195 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch9g0642 | 287 | MobiDBLite | consensus disorder prediction | 71 | 86 | - | - | |
Mch9g0642 | 287 | SUPERFAMILY | WRKY DNA-binding domain | 126 | 194 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch9g0642 | 287 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 73 | 201 | IPR044810 | GO:0003700(InterPro) | |
Mch9g0642 | 287 | ProSiteProfiles | WRKY domain profile. | 129 | 194 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch9g0642 | 287 | SMART | WRKY_cls | 134 | 193 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch9g0642 | 287 | MobiDBLite | consensus disorder prediction | 71 | 120 | - | - | |
Mch9g0642 | 287 | MobiDBLite | consensus disorder prediction | 87 | 120 | - | - | |
Mch9g0642 | 287 | FunFam | WRKY transcription factor 57 | 120 | 194 | - | - | |
Mch9g0642 | 287 | Pfam | WRKY DNA -binding domain | 135 | 192 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch5g0780 | Mch-Chr5:5334212 | Mch9g0642 | Mch-Chr9:4818780 | 1.83E-45 | dispersed | |
Mch8g1391 | Mch-Chr8:10352924 | Mch9g0642 | Mch-Chr9:4818780 | 2.09E-34 | dispersed | |
Mch9g0642 | Mch-Chr9:4818780 | Mch9g2095 | Mch-Chr9:21929943 | 1.40E-26 | dispersed | |
Mch7g1247 | Mch-Chr7:15992564 | Mch9g0642 | Mch-Chr9:4818780 | 9.42E-49 | wgd | |
Mch8g2124 | Mch-Chr8:24315307 | Mch9g0642 | Mch-Chr9:4818780 | 4.95E-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44019 | PF03106 | WRKY | 1.10E-25 | CL0274 | Mch | TF |
Pathway information
