Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0693 ATGGCCGCCGATTCTCACGTCCCTACTCCCAGGGGTCTTCTCTGTAATGCCGGAGCTGGTGCTGCTGCTGGAGTTCTGGCTGCTACGTTTGTGTGCCCTTTGGATGTTATCAAGACTAGATTTCAGGTCCATGGACTGCCAAAGATTGGTAAAGGGAGTCTTATAGTTGGTAGTTTGCAAGACATTTTTCATAAGGAGGGGCTACGTGGAATGTATCGGGGACTCTCGCCTACCGTGCTTGCATTACTTCCTAACTGGGCTGTTTATTTCACAATCTATGGTCAGCTTAAAATCTTTCTTGGCTCTGATGATGAGAGTCATCAGCTTTCAGTAGGTGCCAATATGATGGCTGCTGCTGGTGCTGGGGCTGCTACAACTATTGCAACTAATCCTCTTTGGGTAGTTAAGACAAGACTTCAGACGCAGGGAATGAAATCTGGTGTGCTACCTTATAGAAATACAGTGTCTGCCTTGAGAAGAATAGCCTTTGAAGAAGGAATCCGTGGGTTGTACAGCGGTCTTGTGCCTGCTTTGGCTGGTGTTAGTCATGTCGCGATCCAGTTTCCAACATACGAGAAAATAAAATGTTATTTGGCTAGAAAAGATAACACAACGATGGATAAACTTAGCGCACGTGATGTTGCGGTTGCCTCATCTGTCTCCAAGATATTTGCTTCCACGTTGACCTATCCACATGAGGTGGTGCGTTCCAGGCTCCAGGCACAGGGGTTTCACTCGGAGAAGCGCTATTCTGGCGTAATCGACTGCGCAAAGAAAGTATTTCAGCAAGATGGCCTCCCCGGTTTCTATCGCGGGTGTGCAACCAACCTTCTTAGGACGACACCTGCAGCAGTTATCACATTTACCAGCTTTGAAATGATTCACCGGTTTCTTGTCAACATGTATCCTCCCGATCCACAGGCGCACACATTATGA 936 47.44 MAADSHVPTPRGLLCNAGAGAAAGVLAATFVCPLDVIKTRFQVHGLPKIGKGSLIVGSLQDIFHKEGLRGMYRGLSPTVLALLPNWAVYFTIYGQLKIFLGSDDESHQLSVGANMMAAAGAGAATTIATNPLWVVKTRLQTQGMKSGVLPYRNTVSALRRIAFEEGIRGLYSGLVPALAGVSHVAIQFPTYEKIKCYLARKDNTTMDKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQAQGFHSEKRYSGVIDCAKKVFQQDGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVNMYPPDPQAHTL 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5205884 5209549 + MC09g0573 Mch9g0693 697575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0693 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Mch9g0693 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 99 IPR018108 -
Mch9g0693 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 297 IPR018108 -
Mch9g0693 311 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 105 - -
Mch9g0693 311 SUPERFAMILY Mitochondrial carrier 13 293 IPR023395 -
Mch9g0693 311 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085(InterPro)
Mch9g0693 311 PRINTS Mitochondrial carrier protein signature 218 240 IPR002067 GO:0055085(InterPro)
Mch9g0693 311 PRINTS Mitochondrial carrier protein signature 74 94 IPR002067 GO:0055085(InterPro)
Mch9g0693 311 PRINTS Mitochondrial carrier protein signature 124 142 IPR002067 GO:0055085(InterPro)
Mch9g0693 311 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085(InterPro)
Mch9g0693 311 Pfam Mitochondrial carrier protein 214 300 IPR018108 -
Mch9g0693 311 Pfam Mitochondrial carrier protein 108 201 IPR018108 -
Mch9g0693 311 Pfam Mitochondrial carrier protein 15 102 IPR018108 -
Mch9g0693 311 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 11 300 IPR044712 GO:0006862(InterPro)|GO:0022857(PANTHER)|GO:0035352(PANTHER)|GO:0051724(PANTHER)|GO:0055085(InterPro)|GO:0055085(PANTHER)
Mch9g0693 311 Gene3D Mitochondrial carrier domain 13 301 IPR023395 -
Mch9g0693 311 FunFam NAD+ transporter 106 302 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1352 Mch-Chr4:16895790 Mch9g0693 Mch-Chr9:5205884 3.01E-143 dispersed
Mch9g0693 Mch-Chr9:5205884 Mch9g2111 Mch-Chr9:22021611 4.35E-23 dispersed
Mch9g0693 Mch-Chr9:5205884 Mch8g0448 Mch-Chr8:3201492 6.06E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0693 K15115 - csv:101204681 540.036