Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0696 ATGGGCAGCACGACGTCGTTCTGGTTCTTCACTTTCATTCTCTTCTCCTTCCTCTATTTCTCCACCTCCGCCAGCCGTGCCCCGCCGCCCGCCGCAGCCGGGCCCGTCTGCAACTCCACCCCAGACCCCTCCTACTGCAAATCCGCCCTCCCGAACCAAACCGGCAATGTGTACTCGTACGGGCGGTCGTCGGTCGGAAAGTCGCTGTCGTCGTCCAGGAAGTTCCTCCGGCTGGTGCAGAAGTACCTGCGGACGTCCCGAGGGTCGCTGACGGTGGGCGCGGTGCGGGCGCTGGAGGACTGCGAGCTACTGGCGGGGCTGAACGTGGACTTCCTGACGGCGGCGGTGAGGGCGGTGAACGCGACGAGCAGGGCGCTGCCGGAGATGAAGGCGGAGGAGGTGCAGACGCTGCTGAGTGGGATTCTGACGAACCAGCAGACGTGTTTGGACGGAGTGAAGGCGACGGCGGGTTCTTGGTCTGTCAAAAATGGACTGTCCCTCCCACTTGCCGCTGACACCAAGCTCTACTCCATGTCATTGGCTTTATTTACCAAAGGTTGGGTTCCGAAGAAGAAGAAAAGGGCGACGTGGAACGCCGCCGGAAGACATGGCGGTTTCAGAAACGGACGAATGTCGCTCAAAATGTCGAGCAGAACAAGAGCGATCTACGAGACGGCGAGTCGCCGGAAGCTGCTCGAGACCGACGGCGACGGCGACGACCAGATTGCGGTCAGAGACATCGTCGTCGTCAGTCAAGACGGTACCGGAAATTTCACCACCATTAACGAGGCCATTGTGGCGGCGCCCAACAACTCCGTTTCTACCGACGGCTATTTCTTGATCTTCGTCTCCGCCGGAGTCTACCAAGAATACGTCTCCATCGCCAAGAATAAGAGGTACCTGATGATGATCGGAGACGGAATTAATCAGACCGTCATCACCGGTAACCGGAGCGTCGTCGACGGCTGGACCACTTTCAATTCCGCCACATTTGCGGTGGTCGGACCTGGGTTCGTAGCGGTGAACATGACGTTCCAGAACACGGCCGGAGCAGCGAAGCACCAAGCGGTGGCGGTGCGCAGCGGCGCCGACCTGTCGACGTTCTACCTCTGCAGCTTCGAGGGGTACCAAGACACTCTGTACACCCACTCCCTCCGCCAATTCTACCGCGACTGCGACATCTACGGCACAGTCGACTTCATCTTCGGCAACGCCGCCGTCGTCTTCCAGAACTGCAACCTCTACCCACGCCTTCCGATGGCCAACCAGTTCAACGCCATCACCGCCCAGGGCCGGACCGACCCCAACCAGAACACCGGCACGTCGATCCACAACTGCCGGATCACGCCCGCCGACGATCTCGCCAACAGCAGCTTTCCGGTCAAGACATTTCTCGGCCGGCCCTGGAAGGAGTATTCGCGGACGGTTTATATGCAGAGTTTCATGGACGATCTGATCAATCCGGCGGGGTGGAGGGCTTGGGATGGGGATTTTGCTCTCAACACTTCTTATTATGCGGAATTTGGGAATTTTGGGCCCGGATCCAACACGTCGGAGAGGGTGGATTGGCCGGGATTTCATCTCATTAATGATACTGACGCCGGCAATTTCACGGCCGGCAATTTTGTTTTGGCCGATGATTGGCTGCCGCAGACCGGAGTTCCTTACGCCAGTGGCCTGACGGGGTAG 1689 59.15 MGSTTSFWFFTFILFSFLYFSTSASRAPPPAAAGPVCNSTPDPSYCKSALPNQTGNVYSYGRSSVGKSLSSSRKFLRLVQKYLRTSRGSLTVGAVRALEDCELLAGLNVDFLTAAVRAVNATSRALPEMKAEEVQTLLSGILTNQQTCLDGVKATAGSWSVKNGLSLPLAADTKLYSMSLALFTKGWVPKKKKRATWNAAGRHGGFRNGRMSLKMSSRTRAIYETASRRKLLETDGDGDDQIAVRDIVVVSQDGTGNFTTINEAIVAAPNNSVSTDGYFLIFVSAGVYQEYVSIAKNKRYLMMIGDGINQTVITGNRSVVDGWTTFNSATFAVVGPGFVAVNMTFQNTAGAAKHQAVAVRSGADLSTFYLCSFEGYQDTLYTHSLRQFYRDCDIYGTVDFIFGNAAVVFQNCNLYPRLPMANQFNAITAQGRTDPNQNTGTSIHNCRITPADDLANSSFPVKTFLGRPWKEYSRTVYMQSFMDDLINPAGWRAWDGDFALNTSYYAEFGNFGPGSNTSERVDWPGFHLINDTDAGNFTAGNFVLADDWLPQTGVPYASGLTG 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5226477 5230232 - MC09g0576 Mch9g0696 697578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0696 562 CDD PMEI-like_3 36 187 - -
Mch9g0696 562 SMART PMEI_2 28 182 IPR006501 GO:0004857(InterPro)
Mch9g0696 562 PANTHER PECTINESTERASE 16 551 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Mch9g0696 562 FunFam Pectinesterase 241 560 - -
Mch9g0696 562 FunFam Pectinesterase 34 185 - -
Mch9g0696 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 185 IPR035513 -
Mch9g0696 562 Pfam Plant invertase/pectin methylesterase inhibitor 36 182 IPR006501 GO:0004857(InterPro)
Mch9g0696 562 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Mch9g0696 562 Pfam Pectinesterase 248 544 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Mch9g0696 562 Gene3D - 242 560 IPR012334 -
Mch9g0696 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 185 IPR035513 -
Mch9g0696 562 SUPERFAMILY Pectin lyase-like 243 559 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g0630 Mch-Chr9:4728807 Mch9g0696 Mch-Chr9:5226477 2.25E-50 dispersed
Mch9g0696 Mch-Chr9:5226477 Mch9g0697 Mch-Chr9:5247033 5.85E-140 tandem
Mch11g0703 Mch-Chr11:4630313 Mch9g0696 Mch-Chr9:5226477 1.04E-222 transposed
Mch2g1445 Mch-Chr2:10680067 Mch9g0696 Mch-Chr9:5226477 8.92E-188 transposed
Mch9g1889 Mch-Chr9:20525372 Mch9g0696 Mch-Chr9:5226477 5.95E-177 transposed
Mch7g1192 Mch-Chr7:15614141 Mch9g0696 Mch-Chr9:5226477 2.30E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0696 K01051 - csv:101205321 918.302