Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0697 ATGTCCCCCCTCAAAAACAGAGCTCAAATCCCCTCCATTTCCGCCATTTTCATCTTCTTCTTCTTCTTTCCCCTCATTTTCTCCAGACCCATTTCTCCAAACTCAGAAATAACCCAAAAACTCCATCGCCAAACCGCTCTCTCAATCTGCCATGACACTCTGTACCCACACCTCTGTTTCGAGACCCTCTGTTCTTTCCCCGAATTGGCCGCCCTCTCGCCGGAGAAGGTTGCCGGAAGCGCCCTTAATTTCACCGCCGTCGAGGTCCACGCCGCCTACGCCAATTGCACGAAGCTCAAGACCCGCCTCTACGGTGGCCTGAATCCGACGGAGCGCCGCGCCCTCGACGACTGCCTCGAGCTTCTCGATGGCAGCATTGCCGAGCTCCAAGCTTCGATTTCCGATCTGGCGCCGCCGCAGTCCGCCTCGCGCCACTACAACGACCTGCTGACTCTGGTCAGCGCCGCCATGACCAACCACCGGACCTGCCTTGACGGATTTTACAACAGTTCCGGGACTGTGAGGAGCCGGGTGGAGCAGTACTTGGGTAAAATTGGGCAGCATTTGAGTATCGATTTGGCGATGCTGAAGAAAATCCCGATGGTTAAGAAGCGGGCGGCTGCGGCGGCGGCGGAGGTTTCGCCGGAGTACGGCGCGGTGAGGGGTGGGTTTCCAACGTGGATTTCGGTGAAGGATCGGAGACTGTTGCAGGCGGCGGTGAATGAGACGAAGTTCGATCTGGTGGTCGCGAAGGACGGCTCCGGGAATTTCACCACCGTTGGAGAGGCCGTCGCCGCCGCCCCGAATTCCAGCGCGACCAGGTTTTTAATATACATAAAAGCAGGGGCGTATTTTGAGAACGTTGAAATAGAAAGGAAGAAGACAAATCTGATGTTCGTCGGCGACGGGATCGGAAAGACGCAGATAAAGGGCAACCGGAACGTCGTCGACGGCTGGACAACTTTCCGATCAGCCACCGTCGCCGTGGTAGGAGGCGGGTTCATAGCAAAAGGTATAACCTTCGAGAACTTCGCCGGGCCAAGCAAGCACCAAGCCGTGGCCCTTCGGAGCAACTCCGACCTATCGGCATTTTACCAATGCAGCTTCGTGGCATACCAAGACACTCTCTACGTCCACTCCCTCCGCCAATTCTACCGCGACTGCGACGTCTACGGCACCATCGACTTCATCTTTGGCAACGCCGCCGTCGTCTTCCAAAACTGCAACCTTTACGCTCGAAAACCCAACTCGAACCAACGCAACATCTTCACCGCCCAAGGTCGAGAGGACCCCAACCAGAACACTGGAATCTCCATCTTGAATTGCAAGGTTGAGGCCGCCTCCGATCTAATCCCGGTTCTCTCGTCGTTCCGAACTTACTTGGGTCGACCCTGGAAGCTATACTCAAGGACGATTTTTATACGATCATTTATTGGGCAGCTCGTAGACCCAGTCGGGTGGCTTGAGTGGAATGGGACGTTTGCATTGGACACTTTATATTATGGGGAGTATATGAATCGAGGGCCCGGTTCAAACACAACTGGTCGGGTTAATTGGCCGGGTTATCGGGTGATTAATAGTTCGACGGAGGCGAGTCAGTTTACGGTGGAAGGGTTTTTAGAGGGTAGCCAGTGGCTTAATTCGACCGGGATTCCTTTTTTCTCCGGTTTAGGTTAG 1677 54.86 MSPLKNRAQIPSISAIFIFFFFFPLIFSRPISPNSEITQKLHRQTALSICHDTLYPHLCFETLCSFPELAALSPEKVAGSALNFTAVEVHAAYANCTKLKTRLYGGLNPTERRALDDCLELLDGSIAELQASISDLAPPQSASRHYNDLLTLVSAAMTNHRTCLDGFYNSSGTVRSRVEQYLGKIGQHLSIDLAMLKKIPMVKKRAAAAAAEVSPEYGAVRGGFPTWISVKDRRLLQAAVNETKFDLVVAKDGSGNFTTVGEAVAAAPNSSATRFLIYIKAGAYFENVEIERKKTNLMFVGDGIGKTQIKGNRNVVDGWTTFRSATVAVVGGGFIAKGITFENFAGPSKHQAVALRSNSDLSAFYQCSFVAYQDTLYVHSLRQFYRDCDVYGTIDFIFGNAAVVFQNCNLYARKPNSNQRNIFTAQGREDPNQNTGISILNCKVEAASDLIPVLSSFRTYLGRPWKLYSRTIFIRSFIGQLVDPVGWLEWNGTFALDTLYYGEYMNRGPGSNTTGRVNWPGYRVINSSTEASQFTVEGFLEGSQWLNSTGIPFFSGLG 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5247033 5252968 + MC09g0577 Mch9g0697 697579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0697 558 NCBIfam pectinesterase inhibitor domain 14 198 IPR006501 GO:0004857(InterPro)
Mch9g0697 558 SMART PMEI_2 41 195 IPR006501 GO:0004857(InterPro)
Mch9g0697 558 CDD PMEI-like_3 48 200 - -
Mch9g0697 558 Gene3D - 240 557 IPR012334 -
Mch9g0697 558 SUPERFAMILY Pectin lyase-like 244 556 IPR011050 -
Mch9g0697 558 PANTHER PECTINESTERASE 13 548 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Mch9g0697 558 Pfam Plant invertase/pectin methylesterase inhibitor 48 195 IPR006501 GO:0004857(InterPro)
Mch9g0697 558 ProSitePatterns Pectinesterase signature 2. 390 399 IPR033131 -
Mch9g0697 558 FunFam Pectinesterase 240 557 - -
Mch9g0697 558 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 200 IPR035513 -
Mch9g0697 558 Pfam Pectinesterase 246 542 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Mch9g0697 558 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 48 199 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0064 Mch-Chr10:342442 Mch9g0697 Mch-Chr9:5247033 2.74E-156 dispersed
Mch10g1499 Mch-Chr10:14955190 Mch9g0697 Mch-Chr9:5247033 1.73E-148 dispersed
Mch1g1774 Mch-Chr1:18113086 Mch9g0697 Mch-Chr9:5247033 7.50E-153 dispersed
Mch6g1850 Mch-Chr6:21011905 Mch9g0697 Mch-Chr9:5247033 2.57E-159 dispersed
Mch6g2638 Mch-Chr6:28134168 Mch9g0697 Mch-Chr9:5247033 2.92E-100 dispersed
Mch6g2803 Mch-Chr6:29426869 Mch9g0697 Mch-Chr9:5247033 5.86E-143 dispersed
Mch8g1006 Mch-Chr8:7149800 Mch9g0697 Mch-Chr9:5247033 3.63E-124 dispersed
Mch9g0104 Mch-Chr9:854390 Mch9g0697 Mch-Chr9:5247033 3.16E-52 dispersed
Mch9g0172 Mch-Chr9:1300301 Mch9g0697 Mch-Chr9:5247033 3.35E-163 dispersed
Mch9g0697 Mch-Chr9:5247033 Mch9g1889 Mch-Chr9:20525372 1.72E-144 dispersed
Mch9g0696 Mch-Chr9:5226477 Mch9g0697 Mch-Chr9:5247033 5.85E-140 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0697 K01051 - csv:101205557 897.116