Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0766 AAAACCCTAAGATCGACGATGAGGAAGAAGATGAAAGCGACATTGACGAGGCATTTGCAGGTTCAGTTGGGCCAGGTATCGCTCGTTCCTCTCAATCTCCACCACTCATCTTCCGCCGCCGCATCTGAAGCACCGCCCATGGCCGACGTCGACGCTTCCGACGCTCTGCCTTCATCGTCTCCGCGTGCCGTTGCTGCTCCCGATCATCCTAACTTGGAGGACAGAGATTTCATTCTTAGCCAGGACTTCTTCTGCACCCCTGATTATATAACCCCGGACAATCAAAATCTGTTGAATGGTGTGGATTGCAACAAGGAAAACATTCCTTGCCCCAAATCTCCAGAGAAGATTACTACTGTTAAAACCAAGAGAAAAATACATGACAGTGTTTTGGTACATCCTCTGAGCCCAAGCTTGTCTGGCCGTCAAGAAGTAGTGGAGCTTGGAAATGACACTTTTGAAACAGATGATGTGGATATGGAGAAAGAGACAATGGCAATGCCGAAGAAACAAAACTATGTTTCTCAATCTGCAGTTGCTCTACGTTGTCGAGTTATGCCTCCTCCTTGCATGAAGAACCCATACTTGAAAGATGCTTCAGACATAGGTGTAGACCCATTTGGTAATCAACGAACTAAATGTGCAGGATTTTTTCCCGCACTGTTTAGTGGAGATGGCCTTTCAAGATATCATACTGATTTCCAGGAGATAAAGCAAATAGGGACTGGAAATTTTAGCCGTGTCTTCAAAGTATTAAAGAGAATTGATGGTTGCTTGTACGCTGTCAAACAAAGCACAAGGCAGTTGCATCAAGACATAGAAAGGAGAAGAGCTGTGATGGAAGTTCAAGCTTTGGCAGCTTTGGGATCTCATGAAAACATTGTTGGATACTACTCATCATGGTATGAAAATGAGCAACTCTACATTCAAATGGAGCTCTGTGATTGTAGCTTGTCCATTGGCAGGTATTCTCACCCATTCTCTGAGACAGATGCGCTGAGAGCCTTGCATCAAATTTCAAAAGCATTGCTGTTTGTGCACGAGAAAGGAATAGCTCATTTAGATGTGAAACCTGACAATATTTATGTCAAAGATGGTTTCTATAAACTTGGTGATTTTGGATGTGCAACTCTTCTTGATAATAGCCTACCAATTGAGGAGGGCGATGCACGCTATATGCCTCAAGAAATTCTAAATGATAGATATGATTATCTTGACAAAGTTGATATATTCTCCTTGGGAGCTTCTATTTATGAGATTGTGAGAGGATCGACATTGACAGAAGCACATTTCATGAATCTTAAGGAGGGAAAATTGCCACTTCTTCCTGGTCATTCATTGCAATTTCAAAACTTAATCAGGGCCATGGTGGATCCCGACCCTGTACGACGACCTTCAGCAAGGGAAATTCTTGAGAATCCCATATTTGACAAGGTCAGAAGTAAT 1446 43.02 KTLRSTMRKKMKATLTRHLQVQLGQVSLVPLNLHHSSSAAASEAPPMADVDASDALPSSSPRAVAAPDHPNLEDRDFILSQDFFCTPDYITPDNQNLLNGVDCNKENIPCPKSPEKITTVKTKRKIHDSVLVHPLSPSLSGRQEVVELGNDTFETDDVDMEKETMAMPKKQNYVSQSAVALRCRVMPPPCMKNPYLKDASDIGVDPFGNQRTKCAGFFPALFSGDGLSRYHTDFQEIKQIGTGNFSRVFKVLKRIDGCLYAVKQSTRQLHQDIERRRAVMEVQALAALGSHENIVGYYSSWYENEQLYIQMELCDCSLSIGRYSHPFSETDALRALHQISKALLFVHEKGIAHLDVKPDNIYVKDGFYKLGDFGCATLLDNSLPIEEGDARYMPQEILNDRYDYLDKVDIFSLGASIYEIVRGSTLTEAHFMNLKEGKLPLLPGHSLQFQNLIRAMVDPDPVRRPSAREILENPIFDKVRSN 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5724608 5728551 + MC09g0629 Mch9g0766 697648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0766 482 ProSitePatterns Protein kinases ATP-binding region signature. 240 263 IPR017441 GO:0005524(InterPro)
Mch9g0766 482 FunFam Wee1-like protein kinase 313 480 - -
Mch9g0766 482 Gene3D Phosphorylase Kinase; domain 1 224 314 - -
Mch9g0766 482 SMART serkin_6 234 476 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0766 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0766 482 ProSiteProfiles Protein kinase domain profile. 234 476 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0766 482 Pfam Protein kinase domain 234 476 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0766 482 FunFam WEE protein kinase 224 312 - -
Mch9g0766 482 SUPERFAMILY Protein kinase-like (PK-like) 227 479 IPR011009 -
Mch9g0766 482 MobiDBLite consensus disorder prediction 37 70 - -
Mch9g0766 482 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 66 472 IPR050339 GO:0004672(PANTHER)|GO:0004713(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)
Mch9g0766 482 Gene3D Transferase(Phosphotransferase) domain 1 319 482 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0096 Mch-Chr5:619108 Mch9g0766 Mch-Chr9:5724608 3.72E-15 dispersed
Mch9g0766 Mch-Chr9:5724608 Mch8g2084 Mch-Chr8:23835410 1.41E-12 dispersed
Mch9g0766 Mch-Chr9:5724608 Mch7g1020 Mch-Chr7:14380900 6.36E-13 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77687 PF00069 Pkinase 5.20E-48 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0766 K06632 - csv:101213255 809.675