Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0801 ATGAATTTGGGTGCGGAAGGAGACCCTCAAGAGCGTGCTATCACATTATTTGTGTTGCTTCTCTGTGCTTGTATTGTAATTGGTCATCTTCTTGAGGAAAGTCGTTGGATTAACGAATCAGTCACTGCCCTTTTCATTGGCCTTTTAACTGGAACTTTCATCTTGTTAACAAGCAGTGGCAGACACTCTCGCATCCTAGTGTTTAATGAAGAGCTTTTCTTCATTTATGTTCTTCCACCTATAATATTTAATGCTGGGTTTCAGGTGAAAAAGAAACAGTTCTTCCGAAATTTTCTGATGATCATGTTGTTCGGTGCTGTTGGTACTGTGATCTCATTTCTCATTATATCATTAGGTTCACTCAATTTATTCAAGACATTGGACCTTGGCTACTTAGAAGTGGGTGATTATTTTGCCCTAGGAGCAATCTTTTCGGCCACAGATAGTGTTTGCACGTTGCAGGTGCTTGATCGGGATGAGACTCCTTTTCTGTATAGTCTAGTCTTTGGTGAAGGCGTTGTTAATGATGCTACCTCCATTGTACTTTTCAAAGCAATCCAGAGGTTTGACCTCTCCCACATCACCTCAACCAATGCTTTTGAGCTTCTTGGAAGTTTTCTCTATTTATTCTTCGCAAGCAGCTCGTTGGGAGTATTGGTTGGGTTGGCCAGTGCATTCATCATAAAGAAACTATACTTTGGCAGGCACTCGACTGATCGTGAGGTTGCCTTGATGATTTTAATGCCTTACCTTTCCTATATGATTGCTGAATTGTGCAATCTTAGTGGTATTCTTACCGTGTTCTTTTGTGGGATTGTCATGTCTCATTATACGTGGCATAATGTGACTGAAAGTTCAAGAGTTACCACCAAGCATGCTTTTGCAACATTCTCATATGTTTCAGAGATTTTCATCTTCTCATATGTTGGTATGGATGCTTTGGATATTGAGAAGTGGAGAATTGTTCGCCAAAGGCTTTGGATATTGGCTCGAGTGAGTCTGGTACTGCTAGGTTTAGTCCTTGTTGCAAGAGCAGCTTTTGTATTTCCACTCTCTTTTATATCCAACTTGACTAGAAAGTCTGAGAGTGCCAAAATTGGGTTTAAGCAGCAGGTTACAATTTGGTGGGCTGGGCTTATGAGAGGTGCTGTGTCACTGGCACTTGCTTACAATCAGTTCGCAAATTCAGGCCACACGCAACTGCAAGGAAATGCGATCATGATTACTAGCACAATCACAATTGTTCTCTTTACTAATGTGGTATTTGGGCTGTTAACTAAGCCTATTGTAAGATGCATGCTTCCACCTAGTCATAGACAGATAGATGGTACAATGGAAGCAGAATCTCCACCGAAGTCGCTTGTTCATCCTCTTTTGCACAACGATGAGGATCCCGGGTCCGATGCTGGAGGATCGAACATTCCCCGTCCACCCAGCCTACGTATGCTGTTGACAACTCCAACTCGTTCGGTCCATTACTATTGGCGAATGCTCGATGATCGATACATGCGTCCTATTTTCGGTGGAAGAGGTTTTGTACCTTTCATCCCTGGTTCACCAACTTAA 1566 42.27 MNLGAEGDPQERAITLFVLLLCACIVIGHLLEESRWINESVTALFIGLLTGTFILLTSSGRHSRILVFNEELFFIYVLPPIIFNAGFQVKKKQFFRNFLMIMLFGAVGTVISFLIISLGSLNLFKTLDLGYLEVGDYFALGAIFSATDSVCTLQVLDRDETPFLYSLVFGEGVVNDATSIVLFKAIQRFDLSHITSTNAFELLGSFLYLFFASSSLGVLVGLASAFIIKKLYFGRHSTDREVALMILMPYLSYMIAELCNLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATFSYVSEIFIFSYVGMDALDIEKWRIVRQRLWILARVSLVLLGLVLVARAAFVFPLSFISNLTRKSESAKIGFKQQVTIWWAGLMRGAVSLALAYNQFANSGHTQLQGNAIMITSTITIVLFTNVVFGLLTKPIVRCMLPPSHRQIDGTMEAESPPKSLVHPLLHNDEDPGSDAGGSNIPRPPSLRMLLTTPTRSVHYYWRMLDDRYMRPIFGGRGFVPFIPGSPT 521
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 5992947 6003965 + MC09g_new0143 Mch9g0801 697683
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0801 521 NCBIfam sodium/hydrogen exchanger 3 13 434 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g0801 521 Gene3D - 134 185 - -
Mch9g0801 521 Pfam Sodium/hydrogen exchanger family 21 431 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Mch9g0801 521 MobiDBLite consensus disorder prediction 442 481 - -
Mch9g0801 521 PANTHER SODIUM/HYDROGEN EXCHANGER 13 515 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(InterPro)|GO:0015385(PANTHER)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Mch9g0801 521 PRINTS Na+/H+ exchanger signature 72 83 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g0801 521 PRINTS Na+/H+ exchanger signature 141 151 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g0801 521 PRINTS Na+/H+ exchanger signature 86 100 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g0801 521 PRINTS Na+/H+ exchanger signature 101 109 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g1633 Mch-Chr6:18003274 Mch9g0801 Mch-Chr9:5992947 8.64E-244 dispersed
Mch9g0801 Mch-Chr9:5992947 Mch9g0803 Mch-Chr9:6020606 9.53E-232 dispersed
Mch9g0801 Mch-Chr9:5992947 Mch9g0802 Mch-Chr9:6005704 4.88e-310 tandem
Mch3g0723 Mch-Chr3:11513209 Mch9g0801 Mch-Chr9:5992947 7.67E-45 transposed
Mch7g1138 Mch-Chr7:15254525 Mch9g0801 Mch-Chr9:5992947 3.70E-243 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0801 - - - 0.0