Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g0802 | ATGGATTCATTTTTAGGAAAAGCTGTGATGAAATTGGCTTCGAAAGAAGACCCTGAAGAGTATGCTATCGCATTATTTGTGTTACTTCTCTGTGCTTGTATTGTAACTGGACATCTTCTCGAGAGAATTCGTTGGATGAATGATTCAGTTAATGCCATTTTCATTGGTCTTTTCACTGGAACTCTCATCTTGTTAACAACCCAAGGCAGAAACTCTCGCATCCTAGTGTTTAGTGAAGAGCTTTTCTTCATTTATGTTCTTCCACCTATAATATTTAATGCTGGGTTTCAGGTGAAAAAGAAGCAGTTCTTTCGGAACTTTCTAATGATAATGTTGATTGGTGCTGGTGGTACTGTGATCTCATTTTTCATTATATCAATAGGTTCACTTCATTTATTCAAGACATTAGATATTGGCTTCTTAGACGTGGGTGATTATTTTGCCCTTGGAGCAATCTTATCGGCCACAGATAGTGTTTGCACCTTGCAGGTGCTTGACCAGGATGAGACTCCTTTTCTGTATAGTTTAGTCTTTGGTGAAGGCGTGGTTAATGATGCTACCTCTGTTGTACTTTTCAAAGCAATCCAGAGGTTTGACCTCTCTCACATCACCGCAACCAATGCCATTCAGCTTCTAGGAAGTTTTCTCTATTTATTCTCGACGAGCACCTTGCTAGGAGTATTGGTTGGGTTGTCCAGTGCATACATCATGAAAAAACTGTACTTTGGCAGGCAAGAAGAATTTGGTTTTCTGCACTCGACTAATCGGGAGGTTGCTTTGATGATTTTAATGCCTTACCTTTCATATATGACTGCTGAATTGTGCAATTTTAGTGGTATTCTTACCATGTTCTTTTGTGGGATTGTCATGTCTCATTACACTTGGCATAATGTGACTGAAAGTTCAAGAGTGATCACCAAGCATACTTTTGCAACATTCTCATTTGTTTCAGAGATTTTCATCTTCTTATATGTTGGTATGGATGCCTTGGATATTGAGAAGTGGAGAATTGTTTGCCAAAGGCTTCGGGTATCGGCTGGAGTGAGTCTAATCATGCTAGGTCTAGTCCTTGTTGCGAGAGCAGCTTTTGTATTCCCACTATCTTTTCTATCTAACTTGACTATGAAGTCTCAGAGTGACAAAATTGGGTTTAAGCAGCAGGTTACCATTTGGTGGGCTGGTCTCATGAGAGGTGCTGTATCAGTGGCACTTGCTTATAGTCAGTTTGCGTCATCAGGGCACACGCAATTGAAAGGGAATGCGATCATGATTACTAGCACAATCACAGTTGTTCTCTTTACTAATGTGGTATTTGGGCTGTTAACCAAGCCTATTGTAAGGTACATGCTTTCGCTGAATAATAGACAGATTCATGGTACAATGGTAGCAGATTCTCCTCTGAAATCGCTGAATGATCCTCTTTTGCCCGACCGGGAAGATCCCGAACCCGAAGCTGGAGGATCGAACATTCCCCGTCCACCCAGCCTACGGATGATGTTTACATCTCCAACTCATTCTGTCCATTATTATTGGCGGATGTTCGATGATCGATACATGCGTCCTGTTTTCGGTGGAAGAGGTTTTGTACCTTTCATCCCTGGTTCACCAACTGAAAAGTATATCCACTAA | 1629 | 41.07 | MDSFLGKAVMKLASKEDPEEYAIALFVLLLCACIVTGHLLERIRWMNDSVNAIFIGLFTGTLILLTTQGRNSRILVFSEELFFIYVLPPIIFNAGFQVKKKQFFRNFLMIMLIGAGGTVISFFIISIGSLHLFKTLDIGFLDVGDYFALGAILSATDSVCTLQVLDQDETPFLYSLVFGEGVVNDATSVVLFKAIQRFDLSHITATNAIQLLGSFLYLFSTSTLLGVLVGLSSAYIMKKLYFGRQEEFGFLHSTNREVALMILMPYLSYMTAELCNFSGILTMFFCGIVMSHYTWHNVTESSRVITKHTFATFSFVSEIFIFLYVGMDALDIEKWRIVCQRLRVSAGVSLIMLGLVLVARAAFVFPLSFLSNLTMKSQSDKIGFKQQVTIWWAGLMRGAVSVALAYSQFASSGHTQLKGNAIMITSTITVVLFTNVVFGLLTKPIVRYMLSLNNRQIHGTMVADSPLKSLNDPLLPDREDPEPEAGGSNIPRPPSLRMMFTSPTHSVHYYWRMFDDRYMRPVFGGRGFVPFIPGSPTEKYIH | 542 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 6005704 | 6018704 | + | MC09g0659 | Mch9g0802 | 697684 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g0802 | 542 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 15 | 532 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(InterPro)|GO:0015385(PANTHER)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) | |
| Mch9g0802 | 542 | MobiDBLite | consensus disorder prediction | 472 | 497 | - | - | |
| Mch9g0802 | 542 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 33 | - | - | |
| Mch9g0802 | 542 | NCBIfam | sodium/hydrogen exchanger 3 | 20 | 456 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch9g0802 | 542 | Gene3D | - | 143 | 194 | - | - | |
| Mch9g0802 | 542 | PRINTS | Na+/H+ exchanger signature | 81 | 92 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch9g0802 | 542 | PRINTS | Na+/H+ exchanger signature | 95 | 109 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch9g0802 | 542 | PRINTS | Na+/H+ exchanger signature | 150 | 160 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch9g0802 | 542 | PRINTS | Na+/H+ exchanger signature | 110 | 118 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch9g0802 | 542 | Pfam | Sodium/hydrogen exchanger family | 31 | 447 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
| Mch9g0802 | 542 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 112 | 153 | IPR000595 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch7g1138 | Mch-Chr7:15254525 | Mch9g0802 | Mch-Chr9:6005704 | 1.77E-234 | dispersed | |
| Mch9g0801 | Mch-Chr9:5992947 | Mch9g0802 | Mch-Chr9:6005704 | 4.88e-310 | tandem | |
| Mch9g0802 | Mch-Chr9:6005704 | Mch9g0803 | Mch-Chr9:6020606 | 1.48E-231 | tandem |
Pathway information