Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g0803 | CTGCTGCCATTGGTGCTGGAAGCATACCCGAAAGCGACACACGTCACATTTTTTCTGTTGCTTCTTCTTGCTTGTATTCTGATTGGTCATCTTTTTGAGAAGAAAAGTTGGCTGAATGAGTCAATTACATCCATAGCCATTGGTGTTTTCACTGGAATTCTCATTCTCTTAACTACTAGAGGACAAAGTTCTCACATCCTAGTATTCAATGAACAACTTTTCTTCATTTACCTTCTTCCACCTATAATATTTAATGCCGGGTTTCAGGTGAAGAAGAAACAGTTCTTTCGCAACTTTATGACAATCATATTGTTTGGTGCTTTTGGAAGTGTGATATCGTTTGTCATTATATCACTAGGTTCCCTCCATTTATTCAAGAACTTGGATGTTGGCTTCTTAGACATGCAAGACTATTTTGCACTTGGAGCAATCTTAACTGCGACGGATAGTGTTTGCACCCTACAGGTTCTTAATCAAGATGAGACACCTTTACTTTATAGTCTAGTCTTTGGCGAAGGGGTGGTCAATGATGCTACCTCAGTGGTACTCTTCAATGCAATCCAGCAATTTGACCTCTCTCACATCACTTCTACAAATGCCATTCAATTAGCTGGAAGTTTCTTAAGTTTGTTCTTGGGAAGCACATTGCTGGGATTAGCAGTTGGGCTGCTATCTGCATATATCATGAAAAAGCTACAATTCGGCAGGCACTCTACATATCGTGAAATTGTCATGTTGATTTTGTTGGCCTACCTTTCATATATGATTGCTGAATACTGGCATCTTAGTGGTATTCTTAGTGTGTTTTTTTGTGGGATTGTCATGTCTCACTACACTTGGCATAATGTGACTGAAAGTTGCAGACAGATAAGTAGCCACATTTTTGCAACATTGTCTTTCGTTGCAGAGACTCTTATCTTCCTTTATGTTGGTATGGATGCCTTGGATATTGAAAAGTGGAGTTTTGTTAGAATGAGCCCTGGGACATCAATTGGAGCAAGTTCTATACTTCTGGGTCTTGTTCTTGTTGGGAGAGGAGCTTTTGTATTCCCACTCTCGTTCATATCCAACTTGACCAGAAAGTCTGACAAAGACCGTATTGGGTTTAAGCAGCAGGTTACAATTTGGTGGGCTGGGCTCATGAGAGGGGCTGTATCTGTGGCTCTTGCTTATAATCAGTTTACAATGTCAGGGCAAAATCAAATAAGAGGGGCTTCGATGATGATAACTAGCACCATTTCAATTGTCCTCTTCACTAATTTGGTCTTTGGATTGTTCACCAAGTCTATAGTAAGAATCATGGTTCCTAGAGTCAACAACACAACATATGCAGATTTTCCTACACTGGAATCATTGAGCGATCCGTTCCTGCTCGACGTCGACGATGATCTCGAATCCGACATGGATGGAGCAAACATGCCTCGTACAAACAGTTGCCTGTTGTTTTTGAGATTTCCAACTCAATGTATCAATCACTACTGGCGGAAGTTTGATGAGTGTTTTATGCGTCCTGTGTTTGGAGGGAGTGATACATCATTGGATCCTCACACTCCTGAAAATTTCCCT | 1566 | 40.74 | LLPLVLEAYPKATHVTFFLLLLLACILIGHLFEKKSWLNESITSIAIGVFTGILILLTTRGQSSHILVFNEQLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIILFGAFGSVISFVIISLGSLHLFKNLDVGFLDMQDYFALGAILTATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQQFDLSHITSTNAIQLAGSFLSLFLGSTLLGLAVGLLSAYIMKKLQFGRHSTYREIVMLILLAYLSYMIAEYWHLSGILSVFFCGIVMSHYTWHNVTESCRQISSHIFATLSFVAETLIFLYVGMDALDIEKWSFVRMSPGTSIGASSILLGLVLVGRGAFVFPLSFISNLTRKSDKDRIGFKQQVTIWWAGLMRGAVSVALAYNQFTMSGQNQIRGASMMITSTISIVLFTNLVFGLFTKSIVRIMVPRVNNTTYADFPTLESLSDPFLLDVDDDLESDMDGANMPRTNSCLLFLRFPTQCINHYWRKFDECFMRPVFGGSDTSLDPHTPENFP | 522 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 6020606 | 6025503 | + | MC09g0660 | Mch9g0803 | 697685 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g0803 | 522 | Gene3D | - | 134 | 186 | - | - | |
| Mch9g0803 | 522 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 15 | 513 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(InterPro)|GO:0015385(PANTHER)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) | |
| Mch9g0803 | 522 | Pfam | Sodium/hydrogen exchanger family | 30 | 431 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
| Mch9g0803 | 522 | PRINTS | Na+/H+ exchanger signature | 102 | 110 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch9g0803 | 522 | PRINTS | Na+/H+ exchanger signature | 142 | 152 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch9g0803 | 522 | PRINTS | Na+/H+ exchanger signature | 73 | 84 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch9g0803 | 522 | PRINTS | Na+/H+ exchanger signature | 87 | 101 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch9g0801 | Mch-Chr9:5992947 | Mch9g0803 | Mch-Chr9:6020606 | 9.53E-232 | dispersed | |
| Mch9g0802 | Mch-Chr9:6005704 | Mch9g0803 | Mch-Chr9:6020606 | 1.48E-231 | tandem |
Pathway information