Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0837 ATGCTTCCGTGGGGAGGTCTTAGCTGCTGTTTGAGTGCAGCTGCTCTTTATCTTCTTGGAAGGAGTAGTGGCCGGGATGCGGAGTTATTGAAATCTGTCACGCGGGTCAATCAGTTGAAGGAATTGGCTCAATTGCTTGAGACTGAATGTGTATTACCTCTGGTTGTTGCAATTTCTGGAAGAGTTAGCTCTGATACACCAATAAAGTGCGAGTTTAGTGGTTTGCGGGGTGTAATTGTGGAGGAAACGGCAGAGCAGCATTTCCTGAAGCACAATGATGCAGGATCATGGATTCAGGATTCTGCACTGATGCTATCCATGAGTAAAGAAGTTCCTTGGTATCTGGATGATGGGACTGGTCGTGCATTTGTGGTGGGGGCCCGAAGTGCCACAAATTTTATATTACCAGTAGTGAGTGAGGTATTTGAAGAGTCTGGCAGATCCCTTATGCGTGGCACATTAGATTATCTCCAAGGACTTAAGATGCTTGGAGTGAAGCGAATAGAACGCGTGCTACCTACTGGTACTTCCTTGACTGTCGTTGGTGAGGCTGCCAAAGATGACATTGGTACCATCAGAATACAGAGACCACACAAGGGGCCATTTTATGTCTCCCCGAAAACAATTGATCAACTCATAAGCAATCTTGGGAAGTGGGCAAGGTGGTACAAGTATGCTTCCATGGGTTTGAGCATATTTGGCTTGTATCTCATCACAAAGCATGCTATTCTCTATCTCATGGAGAGAAGGCGTCGCTGGGAATTGCAGAAAAGGGTTCTAGCTGCAGCTGCCAAGAGATCAGGCCAAGAAAATGAAGGGGAAAATGAAAAGACCAACAATGGATCAGATAGTACGAAGAGAGACCGGTCAATGCCAGACCTTTGTGTAATATGTCTTGAGAGAGACTACAACGCTGTTTTTGTCCCGTGCGGCCATATGTGTTGCTGTGTAGCATGTTGTTCACATTTGACAAACTGTCCACTCTGTCGACGACGAATCGAGCTGGTAGTAAAGACCTTCCGCCATTGA 1029 46.16 MLPWGGLSCCLSAAALYLLGRSSGRDAELLKSVTRVNQLKELAQLLETECVLPLVVAISGRVSSDTPIKCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTGRAFVVGARSATNFILPVVSEVFEESGRSLMRGTLDYLQGLKMLGVKRIERVLPTGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASMGLSIFGLYLITKHAILYLMERRRRWELQKRVLAAAAKRSGQENEGENEKTNNGSDSTKRDRSMPDLCVICLERDYNAVFVPCGHMCCCVACCSHLTNCPLCRRRIELVVKTFRH 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6328941 6339067 - MC09g0687 Mch9g0837 697719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0837 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 341 IPR013083 -
Mch9g0837 342 PANTHER - 1 338 IPR044231 GO:0004842(InterPro)|GO:0016567(InterPro)
Mch9g0837 342 FunFam Baculoviral IAP repeat containing 7 304 340 - -
Mch9g0837 342 ProSiteProfiles Zinc finger RING-type profile. 295 330 IPR001841 -
Mch9g0837 342 Pfam E3 Ubiquitin ligase 85 235 IPR022170 GO:0004842(InterPro)|GO:0006996(InterPro)|GO:0016567(InterPro)
Mch9g0837 342 SUPERFAMILY RING/U-box 294 336 - -
Mch9g0837 342 MobiDBLite consensus disorder prediction 266 288 - -
Mch9g0837 342 MobiDBLite consensus disorder prediction 269 288 - -
Mch9g0837 342 Pfam Zinc finger, C3HC4 type (RING finger) 293 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0101 Mch-Chr5:643101 Mch9g0837 Mch-Chr9:6328941 7.98E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0837 K15688 - csv:101218196 647.891