Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0894 ATGGATTTAATAAACGGCGCCGAGCCTGGCGACGTTTCGGTAGCTAAGAATTCCGGTAACCAAGTAGCAGATATTGTTTCTGGTAAGTCTAATGATCCCCAAGAGAAGGATTTGGGTTCAAAAGTGAAGGAGAAAACTGGAAGCATAAGCAATAAGGACATGATTTTCCGAGCTGATAAGATTGATTTCAAGAACTGGGATATTCAGCTGGACAAGCACTTGAGCCGGGCTTGGTCAAGGGACAGGGAAGTGCCAGCCAAAAAGGAAGAATGGGAGATTGACTTGTCTAAACTGGATATTAGATATGTTAAAGCTCATGGAACTTATGGTACTATTTACAGAGGAAATTATGATGGCAATGATGTTGCAGTGAAAGTGCTCGATTGGGGGGAGGATGGTGTTTCCTCGGTTGCTGAAATTGCTGCTCTTCGAGCATCGTTTCGCCAGGAAGTTGCAGTTTGGCATAAGCTTGACCATCCAAATGTTGCCAAGTTTTTTGGAGCATCAATGGGGACGTCCAACCTTAAAATCCCTCCCAAAAGCTCACCAAGCGACAATAACCATTCTTTTCCTTCAAGGGCTTGTTGTGTTGTTGTGGAGTATCTTCCAGGTGGAACACTAAAGAACTTCTTAATCAGAAATAGGAAAAAGAAACTTGCATTTAAGGTTGTGATTCAACTTGTTTTGGATCTTTGTAGAGGTTTGAGTTATCTACACTCTAAAAAGATTGTACACCGTGACATTAAAACAGAGAACGTGCTGCTAGATGCTCAAAGAACTCTAAAAATTGTTGATTTCGGTGTTGCTCGAGTCGAAGCTCAAAACCCAAGGGATATGACGGGAGAGACTGGCACCCTTGGTTATATGGCTCCAGAGGTCCTGGATGGTAAGCCTTATAATCGGAAATGCGATGTCTATAGTTTCGGTATATGTTTATGGGAAACCTATTGCTGTGATATGCCTTATCCCGATCTCAGTTTTGCCGAAGTTTCATCTGCAGTCGTACGACAGAATTTGCGACCCGAGATCCCTAGATGTTGTCCGAGTTCATTGGCAAATATCATGAGAAGATGTTGGGATGCAAATCCAGATAGGCGTCCAGACATGGACGAGGTTGTAAGTTTGTTGGAAGCCATTGATACAAGCAAGGGAGGTGGTATGATACCCGAAGATCAGGCATCTAGCTGTTTCTGTTTCGGCGTAGCTCGTGGTCCATAA 1218 43.43 MDLINGAEPGDVSVAKNSGNQVADIVSGKSNDPQEKDLGSKVKEKTGSISNKDMIFRADKIDFKNWDIQLDKHLSRAWSRDREVPAKKEEWEIDLSKLDIRYVKAHGTYGTIYRGNYDGNDVAVKVLDWGEDGVSSVAEIAALRASFRQEVAVWHKLDHPNVAKFFGASMGTSNLKIPPKSSPSDNNHSFPSRACCVVVEYLPGGTLKNFLIRNRKKKLAFKVVIQLVLDLCRGLSYLHSKKIVHRDIKTENVLLDAQRTLKIVDFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWETYCCDMPYPDLSFAEVSSAVVRQNLRPEIPRCCPSSLANIMRRCWDANPDRRPDMDEVVSLLEAIDTSKGGGMIPEDQASSCFCFGVARGP 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6914541 6918432 - MC09g0737 Mch9g0894 697776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0894 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0894 405 ProSiteProfiles Protein kinase domain profile. 98 379 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0894 405 Pfam Protein tyrosine and serine/threonine kinase 106 375 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0894 405 SMART serkin_6 98 379 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0894 405 MobiDBLite consensus disorder prediction 1 43 - -
Mch9g0894 405 Gene3D Transferase(Phosphotransferase) domain 1 202 392 - -
Mch9g0894 405 FunFam Kinase suppressor of Ras 1 87 181 - -
Mch9g0894 405 MobiDBLite consensus disorder prediction 14 28 - -
Mch9g0894 405 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 62 377 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Mch9g0894 405 SUPERFAMILY Protein kinase-like (PK-like) 80 376 IPR011009 -
Mch9g0894 405 Gene3D Phosphorylase Kinase; domain 1 86 178 - -
Mch9g0894 405 CDD STKc_MAP3K-like 105 376 - -
Mch9g0894 405 FunFam Serine/threonine-protein kinase HT1 202 387 - -
Mch9g0894 405 PRINTS Tyrosine kinase catalytic domain signature 237 255 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0894 405 PRINTS Tyrosine kinase catalytic domain signature 347 369 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0894 405 PRINTS Tyrosine kinase catalytic domain signature 303 325 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0894 405 PRINTS Tyrosine kinase catalytic domain signature 199 212 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0159 Mch-Chr6:1063651 Mch9g0894 Mch-Chr9:6914541 5.20E-185 dispersed
Mch8g1517 Mch-Chr8:11697831 Mch9g0894 Mch-Chr9:6914541 2.24E-187 dispersed
Mch8g2582 Mch-Chr8:28960626 Mch9g0894 Mch-Chr9:6914541 1.27E-69 dispersed
Mch9g0894 Mch-Chr9:6914541 Mch9g2102 Mch-Chr9:21974676 8.52E-37 dispersed
Mch5g0567 Mch-Chr5:3851478 Mch9g0894 Mch-Chr9:6914541 3.09E-227 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77690 PF07714 PK_Tyr_Ser-Thr 1.90E-57 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0894 - - - 0.0