Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0897 ATGGGTAACGCCGACTATGTATACCCATCTTCGGCGGCGGGCGGCGGCGAGTGCTCCCACCGGGTGGCGATTCCGGCGCCGCAGCCGTTTGTGAAGTCGCTGAAGAACTCCCTGAAGGAGACGTTCTTCCCGGACGACCCACTGCGGCAGTTCAAGAACCAGCCGCCGGCGAGAAAGATCCTCCTCGGTTTTCAGTACTTCTTCCCGGTGCTGGAGTGGGCCCCGCGCTACACGTTGGGGCTCCTGAAATCCGACGTCGTTTCAGGCATCACCATTGCCAGCCTCGCCATTCCTCAGGGCATCAGCTACGCCAAGCTCGCTAACTTGCCCCCCATTCTCGGCCTCTATTCAAGCTTCATTCCGCCGTTGATCTACGCGATGATGGGAAGCTCGAAGGATCTAGCGGTGGGGACGGTGGCGGTGGCGTCGCTTCTGATAAGCTCAATGTTGGGAGCGGAGGTTAACGCCGCACAGAATCCCACCCTCTATCTTCACCTTGCCTTCACCGCCACTTTCTTCGCCGGCGTCTTCCAAGCTTCCTTAGGCCTCTTAAGGTTAGGGTTCATCGTGGATTTTTTGTCACATGCAACCATAGTCGGGTTCATGGCGGGCGCTGCGACGGTGGTGTGCCTTCAGCAACTTAAAGGCATCCTCGGCCTAACTCATTTCACCCACGCAACAGACCTTGTCTCCGTCCTCCGCTCCGTCTTCACTCAAGTTCACGAGTGGAGATGGGAAAGCGGAGTTTTGGGATGCGGTTTTCTTTTCTTCCTCCTCGTCACTAGATATTTTAGCAAGAAAAAGCCAAGGTTCTTCTGGATATCTGCAATGGCACCTTTGACCTCAGTGATTCTGGGCAGCCTTCTGGTGTTTCTCACTCATGCAGAGAAACATGGCGTCGAAGTGATTGGAGAATTGAAGAAAGGGCTAAATCCAGTGTCGATCACAGATTTAGTGTTCGTGTCGCCTTATCTTTCCGTTGCAATTAAAACCGGCATCATCACTGGCATCATTGCTCTTGCGGAAGGAATAGCAGTTGGGAGGAGCTTCGCGATGTTCAAGCATTACAACATTGATGGCAACAAAGAAATGGTAGCCATTGGCACCATGAACATGGTCGGCTCTTGCTTCTCTTGCTATCTCACCACAGGCCCATTTTCGCGATCGGCGGTGAACTACAACGCCGGGTGCAAGACGGCGGTATCGAACGTGGTCATGGCGATCGCGGTCATGTTGACGCTCTTGTTCTTGACTCCCCTGTTCCACTACACTCCTCTCGTGGTGCTTTCTTCCATCATCATTTCGGCCATGCTTGGCCTCATCGACTACGAGGCCGCCATTCACCTCTGGAAGGTCGATAAGTTCGATTTCGTTGTCTGCATCGGCGCTTATGCCGGCGTCGTCTTCGCCAGTGTTGAAATTGGCCTGGTCATCGCGGTAGCAATATCTGTGCTTAGACTACTTTTGTTCGTCGCAAGGCCGAGGACGCTTGTGCTCGGAAACCTTCCCAATTCCACTGTTTACAGGAACGTCGAGCAATACCCGAATGCTGATAATGTTCCTGGCATTCTCATACTTGAGATTGACGCACCCATTTACTTTGCAAATTCCAGCTACTTGAGAGAAAGGATTATAAGGTGGGTTGATGAAGAGGAAGACAGGATAAAAGCTTCAGGAGAAAGCACATTACAATATGTACTATTGGACATGAGTGCTGTTGGAAACATTGACACGAGCGGAATAAGCATGTTTGAAGAAATCAAGAAGATTTTAGACAGAAGGGGGTTGCAGATAGTCTTGGCCAACCCCGGTGCAGAGGTGATGAAGAAACTTGACAAGGGCAGGTTCATCGACAACCTCGGACACGAATGGATCTATCTTACAGTTGCCGAAGCTGTAGCAGCCTGCAACTATATGCTTCACTCCTGCAAACCAAACCCTGAAACGGATGAGAAAGCAGAGCGATGGAACAATGTCTAA 1980 51.67 MGNADYVYPSSAAGGGECSHRVAIPAPQPFVKSLKNSLKETFFPDDPLRQFKNQPPARKILLGFQYFFPVLEWAPRYTLGLLKSDVVSGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSKDLAVGTVAVASLLISSMLGAEVNAAQNPTLYLHLAFTATFFAGVFQASLGLLRLGFIVDFLSHATIVGFMAGAATVVCLQQLKGILGLTHFTHATDLVSVLRSVFTQVHEWRWESGVLGCGFLFFLLVTRYFSKKKPRFFWISAMAPLTSVILGSLLVFLTHAEKHGVEVIGELKKGLNPVSITDLVFVSPYLSVAIKTGIITGIIALAEGIAVGRSFAMFKHYNIDGNKEMVAIGTMNMVGSCFSCYLTTGPFSRSAVNYNAGCKTAVSNVVMAIAVMLTLLFLTPLFHYTPLVVLSSIIISAMLGLIDYEAAIHLWKVDKFDFVVCIGAYAGVVFASVEIGLVIAVAISVLRLLLFVARPRTLVLGNLPNSTVYRNVEQYPNADNVPGILILEIDAPIYFANSSYLRERIIRWVDEEEDRIKASGESTLQYVLLDMSAVGNIDTSGISMFEEIKKILDRRGLQIVLANPGAEVMKKLDKGRFIDNLGHEWIYLTVAEAVAACNYMLHSCKPNPETDEKAERWNNV 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6980842 6993459 - MC09g0740 Mch9g0897 697779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0897 659 CDD STAS_SulP_like_sulfate_transporter 514 629 - -
Mch9g0897 659 FunFam Sulfate transporter 31 493 639 - -
Mch9g0897 659 Pfam STAS domain 514 632 IPR002645 -
Mch9g0897 659 NCBIfam sulfate permease 69 632 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g0897 659 Gene3D STAS domain 493 639 IPR036513 -
Mch9g0897 659 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Mch9g0897 659 Pfam Sulfate permease family 82 462 IPR011547 GO:0016020(InterPro)
Mch9g0897 659 ProSiteProfiles STAS domain profile. 513 636 IPR002645 -
Mch9g0897 659 PANTHER SULFATE TRANSPORTER 38 637 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g0897 659 SUPERFAMILY SpoIIaa-like 518 637 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1713 Mch-Chr4:20250577 Mch9g0897 Mch-Chr9:6980842 7.25E-190 dispersed
Mch4g1714 Mch-Chr4:20274672 Mch9g0897 Mch-Chr9:6980842 1.07E-247 dispersed
Mch4g2105 Mch-Chr4:23112478 Mch9g0897 Mch-Chr9:6980842 1.24E-119 dispersed
Mch6g0790 Mch-Chr6:5494502 Mch9g0897 Mch-Chr9:6980842 6.65E-251 dispersed
Mch9g0363 Mch-Chr9:2664778 Mch9g0897 Mch-Chr9:6980842 1.04E-257 dispersed
Mch9g0897 Mch-Chr9:6980842 Mch9g1209 Mch-Chr9:13275016 4.55E-248 dispersed
Mch5g0562 Mch-Chr5:3798306 Mch9g0897 Mch-Chr9:6980842 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0897 K17471 - csv:101222260 1195.26