Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0907 ATGAAGCAAACAGCAACGGGTATGAGGAAGTACGAATCCATTGACCATGGAATCTCACTTCTTGATAGCGCCAGAGCTCGAAGGAGGTGGAGATTTGCCTTTACAGCGATATACTCCATCCGGGCCATGCTATCTCTTGCCGTGTCCAAAAGGGATGACTATTACAACTCCGGCATGTTCGAGTTCGGTTCCTACATGGGGATCGATATGGAGCCAAGCTGCAGCAAAGTTGATCAGAAGAAGCTGATTGAAATGGTGAAGAACAAAAACATGGTGGCTCTGCGTGAGTTAGGGGAAGCTGCAGCCATTGCCACTTCTCTTGGAACAAATCCAGAGAATGGAATCAACGACAATGGTGACGATGTGAGCAAGCGTCGCGACATGTTCGGTTCGAACACTTACCACAAGCGACCCCCAAAGAGTTTCTTTCATTTTGTTGTGGAAGCTTTCAAGGACACCACCATTCTCATTTTACTTGTATGTGCGGCTCTGGCGCTTGGGTTTGGAATAAAAGAACATGGAATTCAAGAAGGATGGTATGAAGGAGGGAGCATATTTGTAGCTGTTGGGTTGGTTGTTGTGGTGTCAGCAATCAGTAACTTCAGACAGGAGATGCAATTCGAGAAGCTATCGAAAATAAGTAACAATATCAAAGTGGAGGTGCTGCGAGATGAAAGACGCATACAAGTTTCCATCTTCGATATCGTGGTCGGAGATGTGGTGGTTCTAAGGCTAGGGGACCAAATTCCAGCTGATGGGTTGTTCTTAAATGGCCATTCTTTGCATGTGGATGAGTCAAGCATGACAGGAGAGAGTGATCATTTGGAACTCAACTCCACAGAGAACCCCTTCTTGTTGTCTGGAACAAAAGTAGTCAATGGACATGGCCAAATGCTGGTGACATCAGTGGGAATGGACACAGCATGGGGTGAGATGATGAGCTCGATATCTCGGGATTCTGAGGAACAAACACCATTACAAGTTCGTCTTAACAAATTGACCTCTTTTATAGGGAAGGTAGGTCTCTCTGTTGCTTTCCTGGTTTTAGTTGTGATGTTAGCACGCTACTTCACAGGAAACACAACAGACGATTTTGGGAATCAGGAGTACAAAGGTCGAAAAACGGATGTAGACGATGTGCTCAATGCAGTTATCCGTATAGTTGCTGCTGCAGTTACCATAGTAGTGGTTGCAATCCCTGAAGGCTTGCCATTGGCTGTGACACTAACACTAGCTTACTCTATGAAGAGAATGATGGCAGATCAGGCAATGGTGAGGAATCTGTCAGCTTGTGAAACAATGGGATCAGCAACTGTGATTTGCACTGACAAAACAGGTACTTTAACACTAAACCAAATGAAAGTGACCAAATTTTGGCTTGGCCAAGAATTCTTCGAGGAGGAAAACTCTTCCAATACCATAGGAGAGGGTGTTCATGAGTTAATAAACCAAGGGGTTGGCTTGAATACAACAGGAAGTGTCTACAAATCTTCATCATCAGAATCCAAAACTGAAATTTCTGGTAGTCCAACTGAGAAAGCGATTCTCTCTTGGGCTGTAACAGAATTTAGTATGGACATGGAAAAGTTGAAGAAATCATACGCCATTCTTCATGTGGAAACCTTCAACTCAGAGAAGAAAAGGAGTGGGGTTTTGGTAAAAAGAATAGCCGATAACACAATCTATCAACATTGGAAAGGAGCTGCTGAGATGATCCTTTCAATGTGTTCAAGTTACTTAGAAAAAAATGGTAAAACATATCCCTTAGATAGTGATAACCAAAGGAAAATTGAGAATGTAATCCAAGGAATGGCAGCAAGTAGCCTAAGATGCATTGCCTTTGCTTATAGACAAATCTCAGAAGAAGAGGAAAACAACACCACACCAATTGCCTCAAACTTGAAAGAAGATGGCTTTACTTTAATGGGAATAGTTGGCATTAAGGATCCATGTAGACCGGGGGCAAAAAAAGCTGTGGTAGCATGTAAATCAGCTGGAGTTTCCATCAAAATGATCACAGGAGACAACATTTTCACAGCAAAAGCTATAGCCACAGAATGTGGAATATTAGATTTTGATCACCACAACTCAGCAAGCAGCGGAGAAGTGATAGAAGGTTCTGAATTCCGAAACTACTCAGACGAAGAGAGACTACAGAGAGTTGATCAAATCAAGGTGATGGCAAGATCCACTCCATTTGACAAGCTTTTGATGGTCCAATGCTTAAAACAAAAAGGCCATGTCGTGGCCGTAACTGGAGATGGCACGAACGATGCTCCGGCTCTTAAAGAAGCCGACATAGGTCTCTCGATGGGCATTGAAGGCACAGAGGTTGCAAAGGAGAGTTCAGACATAGTTATATTGGATGATAACTTCGCCACAGTAGCCACAGTCTTGAGGTGGGGAAGATGTGTATATAACAATATCCAAAAATTTATCCAATTTCAATTAACAGTCAACGTAGCAGCTCTCACAATTAACTTCGTAGCAGCAGTATCAGCTGGAGAAGTTCCCTTAACAGCAGTTCAATTATTATGGGTAAATCTCATAATGGATACATTGGGTGCTCTTGCACTTGCCACTGAGAGACCAAATGATGAACTAATGCACAAACCTCCAGTGGGAAGAACAGAACCCCTTATAACAAATGTCATGTGGAGGAACCTTTTAGCTCAAGCTTTATACCAAATAGCAGTACTCTTAGTTTTCCAGTTCCATGGAAGCACCATATTCAATGTAAGTGAGGGGGTAAATGATACACTAATCTTCAACACTTTTGTTCTCTGCCAAATCTTTAATGAGTTCAATGCAAGGAAACTAGAGAAAAGGAACGTCTTTGAAGGAATTCTAAAGAATCATTTATTTCTTGGGATTGTGGGAATAACAGTTGTTCTACAAGTTGTTATGGTAGAATTCCTAAAGATATTTGCAGATACAGTAAATCTAAATGGTTGGCAGTGGGGACTTTGCATTGCCATTGCAGCTGTGTCTTGGCCAATTGGTTGGACTGTCAAATTCTTGCCTGTTTCTGATAAGCCTTTCCTTAGCTACATCAAGTGTTTTAAGAGCTGA 3072 42.25 MKQTATGMRKYESIDHGISLLDSARARRRWRFAFTAIYSIRAMLSLAVSKRDDYYNSGMFEFGSYMGIDMEPSCSKVDQKKLIEMVKNKNMVALRELGEAAAIATSLGTNPENGINDNGDDVSKRRDMFGSNTYHKRPPKSFFHFVVEAFKDTTILILLVCAALALGFGIKEHGIQEGWYEGGSIFVAVGLVVVVSAISNFRQEMQFEKLSKISNNIKVEVLRDERRIQVSIFDIVVGDVVVLRLGDQIPADGLFLNGHSLHVDESSMTGESDHLELNSTENPFLLSGTKVVNGHGQMLVTSVGMDTAWGEMMSSISRDSEEQTPLQVRLNKLTSFIGKVGLSVAFLVLVVMLARYFTGNTTDDFGNQEYKGRKTDVDDVLNAVIRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRNLSACETMGSATVICTDKTGTLTLNQMKVTKFWLGQEFFEEENSSNTIGEGVHELINQGVGLNTTGSVYKSSSSESKTEISGSPTEKAILSWAVTEFSMDMEKLKKSYAILHVETFNSEKKRSGVLVKRIADNTIYQHWKGAAEMILSMCSSYLEKNGKTYPLDSDNQRKIENVIQGMAASSLRCIAFAYRQISEEEENNTTPIASNLKEDGFTLMGIVGIKDPCRPGAKKAVVACKSAGVSIKMITGDNIFTAKAIATECGILDFDHHNSASSGEVIEGSEFRNYSDEERLQRVDQIKVMARSTPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIEGTEVAKESSDIVILDDNFATVATVLRWGRCVYNNIQKFIQFQLTVNVAALTINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATERPNDELMHKPPVGRTEPLITNVMWRNLLAQALYQIAVLLVFQFHGSTIFNVSEGVNDTLIFNTFVLCQIFNEFNARKLEKRNVFEGILKNHLFLGIVGITVVLQVVMVEFLKIFADTVNLNGWQWGLCIAIAAVSWPIGWTVKFLPVSDKPFLSYIKCFKS 1023
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7172631 7179344 + MC09g0750 Mch9g0907 697789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0907 1023 NCBIfam HAD-IC family P-type ATPase 384 482 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch9g0907 1023 NCBIfam HAD-IC family P-type ATPase 723 833 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch9g0907 1023 SFLD p-type atpase 423 805 IPR044492 -
Mch9g0907 1023 Pfam Cation transporter/ATPase, N-terminus 99 164 IPR004014 -
Mch9g0907 1023 FunFam Calcium-transporting ATPase 769 1011 - -
Mch9g0907 1023 CDD P-type_ATPase_Ca_PMCA-like 122 885 - -
Mch9g0907 1023 PRINTS Sodium/potassium-transporting ATPase signature 563 581 - -
Mch9g0907 1023 PRINTS Sodium/potassium-transporting ATPase signature 434 455 - -
Mch9g0907 1023 FunFam Calcium-transporting ATPase 644 797 - -
Mch9g0907 1023 SFLD Haloacid Dehalogenase 423 805 - -
Mch9g0907 1023 FunFam Calcium-transporting ATPase 451 650 - -
Mch9g0907 1023 Gene3D - 120 317 - -
Mch9g0907 1023 SMART Cation_ATPase_N_a_2 99 170 IPR004014 -
Mch9g0907 1023 Pfam E1-E2 ATPase 217 419 - -
Mch9g0907 1023 Gene3D - 451 650 IPR023299 GO:0000166(InterPro)
Mch9g0907 1023 PRINTS P-type cation-transporting ATPase superfamily signature 643 654 - -
Mch9g0907 1023 PRINTS P-type cation-transporting ATPase superfamily signature 776 788 - -
Mch9g0907 1023 PRINTS P-type cation-transporting ATPase superfamily signature 441 455 - -
Mch9g0907 1023 PRINTS P-type cation-transporting ATPase superfamily signature 665 675 - -
Mch9g0907 1023 PRINTS P-type cation-transporting ATPase superfamily signature 752 771 - -
Mch9g0907 1023 PRINTS P-type cation-transporting ATPase superfamily signature 264 278 - -
Mch9g0907 1023 Gene3D - 148 1005 - -
Mch9g0907 1023 FunFam Calcium-transporting ATPase 195 317 - -
Mch9g0907 1023 PANTHER CATION TRANSPORTING ATPASE 74 1010 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Mch9g0907 1023 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 448 647 IPR023299 GO:0000166(InterPro)
Mch9g0907 1023 Pfam Cation transporting ATPase, C-terminus 837 1007 IPR006068 -
Mch9g0907 1023 Pfam haloacid dehalogenase-like hydrolase 439 766 - -
Mch9g0907 1023 SUPERFAMILY Calcium ATPase, transduction domain A 216 315 IPR008250 -
Mch9g0907 1023 NCBIfam calcium-translocating P-type ATPase, PMCA-type 82 1009 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Mch9g0907 1023 SUPERFAMILY HAD-like 439 857 IPR036412 -
Mch9g0907 1023 SUPERFAMILY Calcium ATPase, transmembrane domain M 101 1009 IPR023298 -
Mch9g0907 1023 Gene3D - 438 797 IPR023214 -
Mch9g0907 1023 ProSitePatterns E1-E2 ATPases phosphorylation site. 443 449 IPR018303 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0622 Mch-Chr8:4460229 Mch9g0907 Mch-Chr9:7172631 3.38E-86 transposed
Mch8g2603 Mch-Chr8:29182114 Mch9g0907 Mch-Chr9:7172631 0 transposed
Mch9g0154 Mch-Chr9:1193848 Mch9g0907 Mch-Chr9:7172631 0 transposed
Mch8g2937 Mch-Chr8:32100329 Mch9g0907 Mch-Chr9:7172631 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0907 K01537 - csv:101220140 1667.9