Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0913 ATGGCGAATAATCATTCCGAGACTCCCGCCGATGATTTCCTCGAGCAGATTCTTGGGATTTCCCCTTTTGGGTCGGCGGAGCAAGGGTTAGCTGGAACTGACGGCGGCTTGGCCGGAGCTGCGGCGGCTCAGGCCCCGATGATGCTTCAGCTTAGCTCCGGCGACGGCGCCGGACATATGGCGACAATTGGGAGTGGAAGTGTTGGTGGAACCGGGTTCCATGGCGCCCCTTTTCCCCTAGGGCTGAGCTTAGACCAAGGGAAGGGAGGGTTTCTGAAAGCAGAGGAAGCTTCTGGAAGTGGGAAGCGGTATTGTGGGGGCGTTGTGGATATTCGAGCTTCATCTGTGAAAAATGTGTTTCCAGGCCAACAAATGCACGCTTCTATGGGTGTAGCCCCGCATCCACCAGCAATGCGCCCTAGGGTTCGGGCAAGACGAGGACAGGCAACTGATCCACATAGCATTGCCGAGCGGTTACGAAGAGAAAGGATTGCAGAGAGAATTAGGGCTTTGCAGGAGCTTGTTCCGAGTGTCAATAAGACGGATAGAGCTGCGATGCTTGACGAAATAGTGGACTACGTAAAGTTCCTACGTCTCCAAGTAAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCTGTGGCTCCACTTGTAACGGATATCCCACTATCATCAGTTGAGGAAGAAGGGAGTGAAGGCGGTAGGAATCAACCCGCATGGGAGAAATGGTCGAACGACGGTACGGAGAGACAAGTCGCCAAGCTTATGGAAGAAAACGTAGGAGCTGCAATGCAATTCCTCCAATCAAAGGCGCTCTGCATCATGCCCATCTCGTTGGCTTCGGCGATTTATCACACACAACCGCCCGATAGCTCGAGTTCGGTGAAGCCAGAGAGCAACCCACCCCCATAG 915 53.88 MANNHSETPADDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAQAPMMLQLSSGDGAGHMATIGSGSVGGTGFHGAPFPLGLSLDQGKGGFLKAEEASGSGKRYCGGVVDIRASSVKNVFPGQQMHASMGVAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHTQPPDSSSSVKPESNPPP 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7244657 7248752 + MC09g0754 Mch9g0913 697795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0913 304 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983(InterPro)
Mch9g0913 304 Pfam Helix-loop-helix DNA-binding domain 153 198 IPR011598 GO:0046983(InterPro)
Mch9g0913 304 MobiDBLite consensus disorder prediction 228 247 - -
Mch9g0913 304 Gene3D - 143 205 IPR036638 GO:0046983(InterPro)
Mch9g0913 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 207 IPR036638 GO:0046983(InterPro)
Mch9g0913 304 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 101 283 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Mch9g0913 304 SMART finulus 154 203 IPR011598 GO:0046983(InterPro)
Mch9g0913 304 FunFam Basic helix-loop-helix transcription factor 143 205 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g1568 Mch-Chr6:16420103 Mch9g0913 Mch-Chr9:7244657 3.20E-87 dispersed
Mch8g1236 Mch-Chr8:8893080 Mch9g0913 Mch-Chr9:7244657 2.90E-10 dispersed
Mch8g2990 Mch-Chr8:32541002 Mch9g0913 Mch-Chr9:7244657 3.16E-49 dispersed
Mch9g0039 Mch-Chr9:387353 Mch9g0913 Mch-Chr9:7244657 3.60E-12 dispersed
Mch9g0278 Mch-Chr9:2081253 Mch9g0913 Mch-Chr9:7244657 6.68E-13 dispersed
Mch9g0533 Mch-Chr9:3929148 Mch9g0913 Mch-Chr9:7244657 3.75E-11 dispersed
Mch9g0913 Mch-Chr9:7244657 Mch9g1063 Mch-Chr9:9814014 3.17E-18 dispersed
Mch9g0913 Mch-Chr9:7244657 Mch6g0634 Mch-Chr6:4333488 3.45E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44034 PF00010 HLH 1.10E-07 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0913 - - - 0.0