Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0924 ATGGAAGAGGTTGAAGAAGCTAATAAAGCGGCCGTGGAGAGCTGCCACAGAGTGCTGAATCTGCTGTCTACGCCGCCGCAAGATCAGTCGAAGCTCAGAAGTTTAATGGCGGAAACAGGGGAGGCTGTGTTCAAGTTTAGGAAAGTTGTGTCGCTTCTGAATTCTTCTGGGTTGGGTCATGCAAGGGTTAGGAAGCAGCTCAAGAAGTTTCAGTTTCAGTTTCAGTTTCAGTTTCAGTCTCAGTCTCAGTCTTCCCCTTTTCTTCCCCGCACCATGTTGTTGGAAAATCCCCCAAATTGCAGAACGGACCTCCTCCAGGGGAAGAATTTGCAGATGGGTCCTCTCTGTTTGAGCTCAAATGGGAAGAGTTCTCTCCAACAAGCTCAATCTGCTTCTGCCCACTATCACCACTTCCTTCAGCAGCAGCAGCAGACTAGGGTGTTGCTTCAGAATAATCCACAGGCTGAAATGATGTATCATCTTAGGGGGAATAATAGTGGGATTAACTTGAATTTTGATAGCTCTAGCTGCACACACACAATGTCATCAACTAGGTCCTTCATTTCCTCCTTGAGCATTGATGGGAGTGTGGCGAATTTGGATGGGAGTGGCGCGTTCCATTTGATCGGGGCGCCCCGGTCCTCAGATCAGAATTCCCATCATAAGAGGAAGTGCAGTGGGAGAGGGGAAGATGGGAGTGTAAAATGTGGAAGCAGTGGAAGATGTCACTGCTCAAAGAAGAGGAAACATAGAGTGAAGCGGTCGATTAAGGTGCCTGCGATAAGTAACAAGCTTGCGGATATCCCTCCTGATGATTATTCATGGAGGAAATATGGCCAGAAGCCAATCAAGGGATCTCCTCACCCGAGGGGATACTATAAGTGCAGCAGCATGAGAGGTTGTCCAGCGAGGAAGCACGTCGAGAGGTGTCTCGAGGAACCTTCAATGCTCATTGTAACATATGAAGGTGAACACAACCATCCCAGAATACCTTCTCAATCTGCAAATACATGA 1014 47.93 MEEVEEANKAAVESCHRVLNLLSTPPQDQSKLRSLMAETGEAVFKFRKVVSLLNSSGLGHARVRKQLKKFQFQFQFQFQSQSQSSPFLPRTMLLENPPNCRTDLLQGKNLQMGPLCLSSNGKSSLQQAQSASAHYHHFLQQQQQTRVLLQNNPQAEMMYHLRGNNSGINLNFDSSSCTHTMSSTRSFISSLSIDGSVANLDGSGAFHLIGAPRSSDQNSHHKRKCSGRGEDGSVKCGSSGRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIPSQSANT 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7413522 7416248 - MC09g0765 Mch9g0924 697806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0924 337 FunFam WRKY transcription factor 65 253 330 - -
Mch9g0924 337 Gene3D WRKY domain 254 330 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Mch9g0924 337 SMART WRKY_cls 269 329 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Mch9g0924 337 MobiDBLite consensus disorder prediction 211 240 - -
Mch9g0924 337 MobiDBLite consensus disorder prediction 216 230 - -
Mch9g0924 337 SUPERFAMILY WRKY DNA-binding domain 267 329 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Mch9g0924 337 ProSiteProfiles WRKY domain profile. 264 330 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Mch9g0924 337 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 333 IPR044810 GO:0003700(InterPro)
Mch9g0924 337 Pfam Plant zinc cluster domain 222 267 IPR018872 -
Mch9g0924 337 Pfam WRKY DNA -binding domain 271 328 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1266 Mch-Chr2:8784493 Mch9g0924 Mch-Chr9:7413522 8.43E-54 dispersed
Mch6g0480 Mch-Chr6:3169097 Mch9g0924 Mch-Chr9:7413522 2.30E-46 dispersed
Mch8g0498 Mch-Chr8:3531660 Mch9g0924 Mch-Chr9:7413522 8.46E-21 dispersed
Mch8g1065 Mch-Chr8:7514298 Mch9g0924 Mch-Chr9:7413522 3.42E-18 dispersed
Mch8g2135 Mch-Chr8:24456203 Mch9g0924 Mch-Chr9:7413522 5.56E-25 dispersed
Mch6g2000 Mch-Chr6:22392784 Mch9g0924 Mch-Chr9:7413522 8.36E-123 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44037 PF03106 WRKY 3.30E-26 CL0274 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0924 - - - 0.0