Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g0942 | ATGGAATTTGATAATGATCTGTTTGGCTACCCAGAAAGTTTCTTGTGGAATAATGACTTGCCTTTTCCCGGGAAAGAAAATGAGAGCTATTCCCACCAATGGTTTGACTTCAATGACTCGGAAGAGATCCTGCTTGATATGCTTGCCGCGACGGCTGGAGGGCCACCGTCATCGCCGGATTCGAGCTCTTGCTCCACTCCGGCGGTGAATGTCAAGGAGGAGTTGGAAGAAGGGAGTTTGAGCGATCTTGTGCAAGAAGGCCATGCAAAGAAGGAGGAGAGGGCGTATAGAGGAGTGCGGCGGCGGCCGTGGGGAAAGTACGCGGCCGAGATAAGAGACTCGACGCGACATGGAGTGAGGGTGTGGTTGGGGACGTTTGAGAGTGCGGAGGCTGCGGCATTGGCCTACGACCAGGCGGCATTTTGCATGAGAGGGGCGTTGGCTACACTCAATTTTCCCGTGGAGGTCGTTCGAGAGTCGCTGAGGGAGATGAAGTACCGGTGGGAGGCGGGGTGCTCGCCCGTGGTGGCGCTCAAGCGGCGCCACTCGATATGGAGGAAGAAGATGGCGGAGGAGGAGAAGATGGAGAAGAAGATGAAGAAGAAAAAAAGTGTAGTTGTTTTTGAGGATTTAGGTGTTGAGTATTTGGAAGAACTACTAAGTTTGACTTCT | 672 | 52.98 | MEFDNDLFGYPESFLWNNDLPFPGKENESYSHQWFDFNDSEEILLDMLAATAGGPPSSPDSSSCSTPAVNVKEELEEGSLSDLVQEGHAKKEERAYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFESAEAAALAYDQAAFCMRGALATLNFPVEVVRESLREMKYRWEAGCSPVVALKRRHSIWRKKMAEEEKMEKKMKKKKSVVVFEDLGVEYLEELLSLTS | 224 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 7684745 | 7685416 | + | MC09g0779 | Mch9g0942 | 697824 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g0942 | 224 | SMART | rav1_2 | 95 | 159 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0942 | 224 | ProSiteProfiles | AP2/ERF domain profile. | 95 | 153 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0942 | 224 | Pfam | AP2 domain | 96 | 145 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0942 | 224 | MobiDBLite | consensus disorder prediction | 55 | 69 | - | - | |
Mch9g0942 | 224 | PANTHER | DNA-BINDING DOMAIN | 68 | 190 | IPR044808 | GO:0003700(InterPro)|GO:0009873(InterPro) | |
Mch9g0942 | 224 | Gene3D | AP2/ERF domain | 95 | 156 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0942 | 224 | CDD | AP2 | 96 | 154 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0942 | 224 | PRINTS | Ethylene responsive element binding protein signature | 96 | 107 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0942 | 224 | PRINTS | Ethylene responsive element binding protein signature | 119 | 135 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch9g0942 | 224 | FunFam | Ethylene-responsive transcription factor 2 | 94 | 155 | - | - | |
Mch9g0942 | 224 | SUPERFAMILY | DNA-binding domain | 95 | 155 | IPR016177 | GO:0003677(InterPro) | |
Mch9g0942 | 224 | MobiDBLite | consensus disorder prediction | 50 | 70 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g2033 | Mch-Chr6:22642161 | Mch9g0942 | Mch-Chr9:7684745 | 4.83E-59 | dispersed | |
Mch7g0967 | Mch-Chr7:14046891 | Mch9g0942 | Mch-Chr9:7684745 | 1.34E-47 | dispersed | |
Mch9g0942 | Mch-Chr9:7684745 | Mch6g0009 | Mch-Chr6:79499 | 3.66E-18 | dispersed | |
Mch9g0939 | Mch-Chr9:7655078 | Mch9g0942 | Mch-Chr9:7684745 | 1.06E-25 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44039 | PF00847 | AP2 | 7.70E-14 | CL0081 | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch9g0942 | K14516 | - | csv:101205053 | 254.218 |