Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0976 ATGGATTCGGCGAGGAGTTGGTTTAATAAGCTTCAACCAAGAGATAGGTTGAGGGGTTCTTCAAAGAAGAAGGATAGTATGGGAGGAAATGAGGATTCTACGGAACAGACAGATGAAGAGGCGCTCTCTAATATCACAAAGCAGAAGGTTGCTGCGGCGAAGCAGTATATCGAGAACCATTACAAGGAGCAAATGAAAAATCTGCAGGAGAGAAAGGAACGACGAAATATATTGGAAAAGAAGTTGGCTGATGCTGATGTTTCTGAAGAAGATCAAACCAATTTACTTAAATTTTTAGAGAAGAAGGAAACTGAATACATGCGCCTCCAAAGGCACAAAATGGGTGTCGATGATTTTGATTTACTAACAATTATTGGGAAAGGTGCTTTTGGGGAGGTTCGTGTTTGTAGAGAGAAGACTTCAGGTCAGGTGTATGCCATGAAAAAGCTTAAAAAATCGGAGATGCTTCGGAGGGGCCAGGTGGAGCATGTGAGAGCTGAAAGAAATCTGCTTGCTGAAGTTGATAGCAATTGCATCGTGAAACTCTATTGTTCTTTTCAAGATGATGAGTTTCTTTACCTTATTATGGAGTATCTACCTGGTGGAGATATGATGACTTTATTGATGAGAAAGGATACTTTGACTGAAGATGAAGCAAGGTTCTATGTTGGAGAGATAGTTTTGGCCATTGAATCTATTCATAAGCACAATTACATTCATAGAGATATTAAGCCTGACAACTTGCTTCTTGATAAATTTGGGCACTTGAGACTCTCTGACTTTGGACTATGCAAGCCATTAGATTGCAGTACACTCCAAGAACAAGATTTTGATATGGCGAGTACCCGTAATGGGGCTGGACAGACTGATGAGCGCTCCGGAACTCCTGCACGCACTCAACAAGAGCAACTACAACATTGGCAGAAGAATCGGAGAATGCTTGCTTATTCCACAGTTGGTACGCCAGATTATATTGCTCCAGAGGTTTTGTTGAAGAAAGGTTATGGAATGGAATGTGACTGGTGGTCACTTGGAGCTATTATGTATGAAATGCTTGTCGGATACCCACCATTTTACTCCGATGATCCAATGTCAACGTGTCGGAAGATAGTGAACTGGAGAACTCATTTGAAGTTTCCGGAGGAGGCAAAGCTATCTCCCATGGCAAAAGATGTCATCAGTAGACTACTATGCAATGTTAACCAAAGGCTAGGAACAAATGGCGCAGATGAAATTAAGGTTCATCCGTGGTTTGAAGGTATTGAATGGGAGAGGCTATACCAAATGGAAGCTGCATTTGTTCCCGAGGTTAAAGATGAGCTAGACACCCAAAATTTTGAGAAGTTTGAAGAGTCTGACTCGCAAAGCTGTACTTCATCTAAATCTGGTCCATGGAGAAAGATGCTCTCATCCAAGGACATCAACTTCGTCGGATACACTTACAAGAACTTCGAAATTGTCAATGATTATCAATTGCCTGGGATGGCTGAATTGAAGAAAAAATGCAGCAAACCAAAAAGACCGTCAATCAAGTCACTCTTTGATGGCGAGTCGGAGGCATCAGATGCAGATGCATCTGATGCATCTACTTGTAGTCAGCCCACCGAAGGTAGTAGCTTTTCGCACTCAATGACTTCTCAACTGGATGGATTTGAAAAGAGGAAAGAGTCGATGTAA 1677 41.8 MDSARSWFNKLQPRDRLRGSSKKKDSMGGNEDSTEQTDEEALSNITKQKVAAAKQYIENHYKEQMKNLQERKERRNILEKKLADADVSEEDQTNLLKFLEKKETEYMRLQRHKMGVDDFDLLTIIGKGAFGEVRVCREKTSGQVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGEIVLAIESIHKHNYIHRDIKPDNLLLDKFGHLRLSDFGLCKPLDCSTLQEQDFDMASTRNGAGQTDERSGTPARTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSPMAKDVISRLLCNVNQRLGTNGADEIKVHPWFEGIEWERLYQMEAAFVPEVKDELDTQNFEKFEESDSQSCTSSKSGPWRKMLSSKDINFVGYTYKNFEIVNDYQLPGMAELKKKCSKPKRPSIKSLFDGESEASDADASDASTCSQPTEGSSFSHSMTSQLDGFEKRKESM 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8135716 8147536 + MC09g0806 Mch9g0976 697858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0976 558 CDD STKc_NDR_like 117 482 - -
Mch9g0976 558 Gene3D Phosphorylase Kinase; domain 1 90 202 - -
Mch9g0976 558 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0976 558 Pfam Protein kinase domain 121 271 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0976 558 Pfam Protein kinase domain 315 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0976 558 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0976 558 MobiDBLite consensus disorder prediction 523 547 - -
Mch9g0976 558 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524(InterPro)
Mch9g0976 558 SMART pkinase_C_6 419 483 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0976 558 CDD MobB_NDR_LATS-like 53 114 - -
Mch9g0976 558 FunFam Non-specific serine/threonine protein kinase 203 270 - -
Mch9g0976 558 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Mch9g0976 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0976 558 Coils Coil 61 81 - -
Mch9g0976 558 SMART serkin_6 119 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0976 558 SUPERFAMILY Protein kinase-like (PK-like) 96 471 IPR011009 -
Mch9g0976 558 MobiDBLite consensus disorder prediction 505 558 - -
Mch9g0976 558 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 486 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Mch9g0976 558 Gene3D Transferase(Phosphotransferase) domain 1 203 272 - -
Mch9g0976 558 Gene3D Transferase(Phosphotransferase) domain 1 310 438 - -
Mch9g0976 558 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0976 558 FunFam Non-specific serine/threonine protein kinase 90 202 - -
Mch9g0976 558 MobiDBLite consensus disorder prediction 1 42 - -
Mch9g0976 558 MobiDBLite consensus disorder prediction 9 31 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch7g0950 Mch-Chr7:13925856 Mch9g0976 Mch-Chr9:8135716 1.42E-140 dispersed
Mch7g0952 Mch-Chr7:13933984 Mch9g0976 Mch-Chr9:8135716 0.00E+00 dispersed
Mch8g0686 Mch-Chr8:4915948 Mch9g0976 Mch-Chr9:8135716 6.80E-210 dispersed
Mch9g0976 Mch-Chr9:8135716 Mch6g0715 Mch-Chr6:4914990 2.03E-33 dispersed
Mch9g0976 Mch-Chr9:8135716 Mch6g0941 Mch-Chr6:6647365 1.78E-223 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77693 PF00069 Pkinase 3.90E-63 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0976 K08790 - csv:101221720 1000.35