Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0985 ATGGCTGCCTCAGCTTCTTCTTCTTCTTCTCCTTGTGGAGCTTGCAAGTTTCTTAGAAGAAAGTGTGTCAATGGCTGCATCTTTGCCCCTTACTTCCGCCACGAACTCGGCACCTCTCACTTCTCTGCCGTCCACAAGGTCTTCGGGGCAAGCAACGCTTCCAAGCTTCTCGCTCACCTCCCGGTCTCCCACCGCTGCGAGGCCGCGATCACGATCTCGTACGAAGCTCAAGCTCGGCTGCAAGATCCGATCTATGGCTGTGTCTCGCATATTTTTACTCTCCAACAACAGGTTCTGAATCTAAGGGCTCAGGTGGCTTATTTGAGAGAACAAGCAGCTCAAATTCTTCTCAACAACTACACCATAAGAAACCCTAACGAATTACTGTACGGAAAATCTCCATTTTCCGGCGACCCATTGCAGGATCTTCAGAGTTGGCTTCTGGCGGAGGACCGGAGCGCCGCCGCGCCGGAGTTCGAACCTGCGGCGGTGCCTTTCGTTGAGATGAGCTTGGCCGATCCAAATGTCGCCGGAGATTGCTGCTGC 546 53.48 MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHLPVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNYTIRNPNELLYGKSPFSGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAGDCCC 182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8297890 8298657 - MC09g0812 Mch9g0985 697867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0985 182 PANTHER LOB DOMAIN CONTAINING PROTEIN 9 125 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
Mch9g0985 182 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Mch9g0985 182 ProSiteProfiles LOB domain profile. 10 112 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2025 Mch-Chr6:22589244 Mch9g0985 Mch-Chr9:8297890 2.76E-62 dispersed
Mch7g0755 Mch-Chr7:12182975 Mch9g0985 Mch-Chr9:8297890 7.56E-43 dispersed
Mch9g0985 Mch-Chr9:8297890 Mch9g1540 Mch-Chr9:17704009 4.08E-43 dispersed
Mch9g0985 Mch-Chr9:8297890 Mch7g0754 Mch-Chr7:12166732 5.62E-49 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44043 PF03195 LOB 3.30E-34 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0985 K13945 - csv:101220863 306.219