Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g0985 | ATGGCTGCCTCAGCTTCTTCTTCTTCTTCTCCTTGTGGAGCTTGCAAGTTTCTTAGAAGAAAGTGTGTCAATGGCTGCATCTTTGCCCCTTACTTCCGCCACGAACTCGGCACCTCTCACTTCTCTGCCGTCCACAAGGTCTTCGGGGCAAGCAACGCTTCCAAGCTTCTCGCTCACCTCCCGGTCTCCCACCGCTGCGAGGCCGCGATCACGATCTCGTACGAAGCTCAAGCTCGGCTGCAAGATCCGATCTATGGCTGTGTCTCGCATATTTTTACTCTCCAACAACAGGTTCTGAATCTAAGGGCTCAGGTGGCTTATTTGAGAGAACAAGCAGCTCAAATTCTTCTCAACAACTACACCATAAGAAACCCTAACGAATTACTGTACGGAAAATCTCCATTTTCCGGCGACCCATTGCAGGATCTTCAGAGTTGGCTTCTGGCGGAGGACCGGAGCGCCGCCGCGCCGGAGTTCGAACCTGCGGCGGTGCCTTTCGTTGAGATGAGCTTGGCCGATCCAAATGTCGCCGGAGATTGCTGCTGC | 546 | 53.48 | MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHLPVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNYTIRNPNELLYGKSPFSGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAGDCCC | 182 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 8297890 | 8298657 | - | MC09g0812 | Mch9g0985 | 697867 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g0985 | 182 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 9 | 125 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) | |
Mch9g0985 | 182 | Pfam | Lateral organ boundaries (LOB) domain | 11 | 108 | IPR004883 | - | |
Mch9g0985 | 182 | ProSiteProfiles | LOB domain profile. | 10 | 112 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g2025 | Mch-Chr6:22589244 | Mch9g0985 | Mch-Chr9:8297890 | 2.76E-62 | dispersed | |
Mch7g0755 | Mch-Chr7:12182975 | Mch9g0985 | Mch-Chr9:8297890 | 7.56E-43 | dispersed | |
Mch9g0985 | Mch-Chr9:8297890 | Mch9g1540 | Mch-Chr9:17704009 | 4.08E-43 | dispersed | |
Mch9g0985 | Mch-Chr9:8297890 | Mch7g0754 | Mch-Chr7:12166732 | 5.62E-49 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44043 | PF03195 | LOB | 3.30E-34 | No_clan | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch9g0985 | K13945 | - | csv:101220863 | 306.219 |