Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0990 CAGGACGAATCTGCAAATATCGTTGTTGGTTCCCAAATATGGGTGGGAGATATAGAATCTGTTTGGATTGATGGAGTCGTATTGAACATTACTGGGGAAGAGGCTGAGATCCAAACTAGTGATGGGAGGCAGGTTGTTGTAAAAATGTCAAATATATATCCAAGGGATGCAGAAGGTCCTACTACTGGAATCGATGATATGACTAAAATGTCATATTTGAATGAGCCAGGATTGCTGCATAATTTGGCTATCAGATATGCAATAAATGAAATCTATACTTATACTGGAAACATTCTTATTGCCATCAACCCATTCCAAAGTATTTCAAATCTGTATGATGCTTATGTTATGGAGCAGTACAAGGGAGCACCACTTGGGGAGCTGAAGCCTCATGTTTTTGCAATTGCTGATGTCGCATATAGGGCTATGATAACTAATGGGAAAAGCAACTCCATTCTGGTGAGTGGTGAAAGTGGGGCTGGTAAGACGGAAACCACCAAAATGCTTATGTGTTACCTTGCATTTTTGGGTGGCCATGCTGCTTCTGAAGGACGGACTGTTGAACAACAAGTTTTAGAATCAAATCCAGTTCTTGAAGCTTTTGGCAATGCAAAAACAGTAAGAAACAACAATTCAAGCCGTTTTGGGAAATTTGTCGAGATACAATTTGACAAGAAGGGAAGAATATCAGGAGCTGCCATCAGAACTTATCTTCTTGAGAGATCACGGGTTTGCCAAATATCAGACCCTGAGCGGAACTATCATTGCTTTTATCTTCTCTGTGCAGCTCCACCTCAGGAGAGAGAGAGATATAAGTTGGGAAATCCAAAATCATTTCACTATCTAAACCAATCAAATTGTTATGAACTGGCTGGTGTGAATGATGCTCATGATTATCTTGCTACAAAGAGAGCCATGGATATTGTTGGAATAGGTGAACAAGAACAGGATGCAATTTTCAGAGTTGTGGCTGCAATTCTCCATCTTGGTAATATTGACTTTGCAAAAGGAGAAGAGTCTGATTCATCATTTGTAAAAGATGACGAATCAAAATTTCATCTTCACATGACAGCAGAGCTTCTCATGTGTGACCCCCAGGCACTGGAAGATGCTCTTTGCAAGCGCATGATAATTACACCAGAGGATGTCATTAAGAGAAGTCTTGATCCGCTTGGTGCAACAGTTAGCAGGGATGGCTTAGCCAAGACAATATATTCTCGTTTGTTTGACTGGTTGGTAGATAAAATCAACGTTTCCATCGGACAAGATCCTGGCTCAAAATATCTGATTGGAGTCCTTGATATTTATGGTTTTGAGAGCTTTAAAACTAATAGTTTTGAGCAATTCTGCATCAATTACACAAACGAAAAGCTGCAACAACATTTCAACCAGCACGTATTCAAGATGGAGCAAGAAGAATATGTAAAAGAGGAAATTGATTGGAGCTACATTGAATTTGTCGATAATCAAGATGTCCTGGATCTCATTGAGAAGAAACCAGGTGGAATTATTGCTCTCCTTGATGAAGCTTGCATGTTCCCAAAATCAAATCATGAAACATTTTCACAAAAGCTGTACCAGACCTTCAAGAACCATAAACGCTTCATCAAGCCAAAATTGGCTCGCTCAGATTTTGAAATTGTCCATTATGCAGGAGATGTTGTATATCAGTCCGATCAGTTTCTTGACAAAAATAAAGATTATGTTGTCACTGAACATCAAGATTTGCTAAGTGCTTCAAAATGTTCTTTTGTTGCTGGTCTCTTCCCTCCTTCTCCTGAGGAGACAGCCAAGCCATCAAAGTTTTCTTCAATTGGCTCTCGTTTTAGGTTACAACTACAGCAGTTGATGGAAACAATTAATTCAACAGAACCGCATTACATAAGATGCGTGAAGCCCAATACTGTCCTACAACCTGCCATATTTGAGAATGCTACTGTTATGCAACAACTACGTTCTGGTGGTGTTTTGGAGGCAGTTAGAATCAAATGTGCAGGCTACCCTACTCATAGAACATTTTCTGAATTTTTAGCTCGATTTGAAATTCTTGCACCCGAGGTATTGGAAGGGGACTATGAAGAAAAGGTGGCATGCGAAAAGATTCTAGAGAAGACGGGGCTTAAAGGTTATCTGATAGGTAAATCAAAAATTTTCTTAAGAGGTAGACTGATGGCTGAACTAGATGCACAGAGAACAAGAATATATGGTGCTGCTGCCGCAACCATACAGAAGCATATCAGAGCTCGAAGTGTTCGTAAAATGTACGTTGCCATGCGAAGAAGTGGCATTCGTGTACAATCATATTGGAGAGGTGTTCTTGCTCGTGAGTTATATGAACTTAAGAGAAGGGAAGCATCTGCCATCAAAATTCAAAAGAATATTCGTGGATACCTTGCTAGGAAGGCCCATATTAAAACACGGTTCTCTATTGTTGTTCTTCAGGCTGGTTTGCGAGCAATGGTTTCTCGGAGTAAATACAGACACATGAGGCAAGCTAAGGCTGCAATAGTTATTCAATCTTGTTGGCATCAGTATAGAAACTCTTCGGAGTATAAGATGATTAGAAAATCATCAACCAGTTCACAATGCAAATCTAGTACAGGAACTGATGGTGAAGGTCTTAAGAAGCACAGGATG 2637 39.86 QDESANIVVGSQIWVGDIESVWIDGVVLNITGEEAEIQTSDGRQVVVKMSNIYPRDAEGPTTGIDDMTKMSYLNEPGLLHNLAIRYAINEIYTYTGNILIAINPFQSISNLYDAYVMEQYKGAPLGELKPHVFAIADVAYRAMITNGKSNSILVSGESGAGKTETTKMLMCYLAFLGGHAASEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPPQERERYKLGNPKSFHYLNQSNCYELAGVNDAHDYLATKRAMDIVGIGEQEQDAIFRVVAAILHLGNIDFAKGEESDSSFVKDDESKFHLHMTAELLMCDPQALEDALCKRMIITPEDVIKRSLDPLGATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPGSKYLIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYVKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSNHETFSQKLYQTFKNHKRFIKPKLARSDFEIVHYAGDVVYQSDQFLDKNKDYVVTEHQDLLSASKCSFVAGLFPPSPEETAKPSKFSSIGSRFRLQLQQLMETINSTEPHYIRCVKPNTVLQPAIFENATVMQQLRSGGVLEAVRIKCAGYPTHRTFSEFLARFEILAPEVLEGDYEEKVACEKILEKTGLKGYLIGKSKIFLRGRLMAELDAQRTRIYGAAAATIQKHIRARSVRKMYVAMRRSGIRVQSYWRGVLARELYELKRREASAIKIQKNIRGYLARKAHIKTRFSIVVLQAGLRAMVSRSKYRHMRQAKAAIVIQSCWHQYRNSSEYKMIRKSSTSSQCKSSTGTDGEGLKKHRM 879
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 8383091 8433233 - MC09g0815 Mch9g0990 697872
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0990 879 Pfam Myosin head (motor domain) 65 720 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch9g0990 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 785 IPR027417 -
Mch9g0990 879 FunFam Myosin 2 312 425 - -
Mch9g0990 879 FunFam Myosin heavy chain 252 307 - -
Mch9g0990 879 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch9g0990 879 Pfam Myosin N-terminal SH3-like domain 10 50 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch9g0990 879 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Mch9g0990 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 856 IPR027417 -
Mch9g0990 879 SMART iq_5 734 756 IPR000048 GO:0005515(InterPro)
Mch9g0990 879 SMART iq_5 757 779 IPR000048 GO:0005515(InterPro)
Mch9g0990 879 SMART iq_5 782 804 IPR000048 GO:0005515(InterPro)
Mch9g0990 879 SMART iq_5 805 827 IPR000048 GO:0005515(InterPro)
Mch9g0990 879 SMART iq_5 830 852 IPR000048 GO:0005515(InterPro)
Mch9g0990 879 Gene3D Kinesin motor domain 65 662 IPR036961 -
Mch9g0990 879 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch9g0990 879 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch9g0990 879 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch9g0990 879 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch9g0990 879 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch9g0990 879 ProSiteProfiles IQ motif profile. 758 787 - -
Mch9g0990 879 PANTHER MYOSIN 21 864 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Mch9g0990 879 Pfam IQ calmodulin-binding motif 763 778 IPR000048 GO:0005515(InterPro)
Mch9g0990 879 Pfam IQ calmodulin-binding motif 785 803 IPR000048 GO:0005515(InterPro)
Mch9g0990 879 CDD MYSc_Myo11 76 720 IPR036018 -
Mch9g0990 879 Gene3D - 252 310 - -
Mch9g0990 879 Gene3D - 439 623 - -
Mch9g0990 879 Gene3D - 666 733 - -
Mch9g0990 879 MobiDBLite consensus disorder prediction 856 879 - -
Mch9g0990 879 Gene3D - 784 835 - -
Mch9g0990 879 Gene3D - 736 783 - -
Mch9g0990 879 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch9g0990 879 ProSiteProfiles IQ motif profile. 806 835 - -
Mch9g0990 879 ProSiteProfiles IQ motif profile. 783 807 - -
Mch9g0990 879 SMART MYSc_2a 56 733 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch9g0990 879 FunFam Class V myosin 439 581 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g0493 Mch-Chr9:3645648 Mch9g0990 Mch-Chr9:8383091 0 dispersed
Mch9g0990 Mch-Chr9:8383091 Mch9g1662 Mch-Chr9:18689394 1.71E-174 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0990 K10357 - csv:101220626 1576.22