Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g1070 | ATGAACGATGTGAGGGATCAGCAGCGGAATGCGAATGATCTTCATCATCAACATCACCGTCGAGAGGAAATCCCGGAGCTGGATTTCGAGAAGTTGGAGGTCGTGACGGCGCTCGGCCGGGGGGCGAAGGGAGTGGTGTTTCTGGCGCGGAATGCGACGGAGAACGACGGCGAATGGCTGGCGCTCAAGGTCATTTCCAGGGCGTTGATCGAGAGGAAAGCCACGGTCGTAAGTACCGATGGATCCGAGTACCGGAGAGTCTGCTTCGAACGGGAGGTTTTGCGTCTGTTTCGGCATCCTCTGTTGCCGCGATTGCGCGGCGTTTTGGATACTCAGAAAGTCGTAGGCTACGCCATTGATTATTGCGCAGGACGAGATCTTAATACTCTCCGGAAGAAACAGACCGAGAAGATGTTCTCCGATGACGCTATCAGATTTTACGCTGCGGAATTAGTTATGGCGTTGGAGTATGTACACAGCTTAGGAATAGTTTACAGAGATTTGAAGCCGGAGAACGTCATGGTTCAACAGAACGGCCATGTGATGCTTGTCGATTTTGATCTCTCTACAAGGCTCTCTCAGAGATCTCCTAAATCGTCTCCTACACCATCGCCGAAGGTTTCGACGGAATCCAAATCGGCGAAGATGAGGAAGAAGAAGAAGCGATTCGTTTCATTTAACCGATTCTGCAACTCTGGCGTTTCGCCGGAGGACTCGCTGTACCGCCCCGATCAACGGGCGGAGAAACCTAAATGGCCGCCGGACGCGTCGGAATCGGAGAAGTCGAACTCGTTCGTGGGGACGGAGGAGTACGTGGCGCCGGAAATCGTGGCCGGGAAGGGGCATGACTTCGCCGTCGACTGGTGGTCCCTCGGCGTTGTTCTGTACGAGATGCTGTACGGGACGACGCCGTTTAGGGGATCGAATCGGAAGGAAACGTTCTACCGGATTCTGACAATGTCGCCGGATCTGTGCGGGGAAGCGACGCCGTTGAGAGACTTAATCAGGAAACTGCTGGAGAAAGATCCGGCGAAAAGGATCGAACTCGACGAGATCAAGGGCCACAATTTCTTCAGAGGAACCGATTGGGATTTGGTTTTGCAAATTCCGCGGCCGCCGTCGCTGCCCGGGATGGAGGCGGCCGCGGAGGACACAGAAGGAAATAACACAATTGATGTGGAGTCCTTTGTCCAAGACGTATTTTGCAGCCGCGAATCGGAGAAGAAGAATCATAATAATGGTGAAGAAGGAAAGGGATTTAATCCTAATTACACGGAGTCTGACAGATTTCTTGTGTTCTGA | 1302 | 52.92 | MNDVRDQQRNANDLHHQHHRREEIPELDFEKLEVVTALGRGAKGVVFLARNATENDGEWLALKVISRALIERKATVVSTDGSEYRRVCFEREVLRLFRHPLLPRLRGVLDTQKVVGYAIDYCAGRDLNTLRKKQTEKMFSDDAIRFYAAELVMALEYVHSLGIVYRDLKPENVMVQQNGHVMLVDFDLSTRLSQRSPKSSPTPSPKVSTESKSAKMRKKKKRFVSFNRFCNSGVSPEDSLYRPDQRAEKPKWPPDASESEKSNSFVGTEEYVAPEIVAGKGHDFAVDWWSLGVVLYEMLYGTTPFRGSNRKETFYRILTMSPDLCGEATPLRDLIRKLLEKDPAKRIELDEIKGHNFFRGTDWDLVLQIPRPPSLPGMEAAAEDTEGNNTIDVESFVQDVFCSRESEKKNHNNGEEGKGFNPNYTESDRFLVF | 433 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 9970923 | 9973170 | + | MC09g0865 | Mch9g1070 | 697952 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g1070 | 433 | FunFam | Serine/threonine-protein kinase OXI1 | 126 | 194 | - | - | |
Mch9g1070 | 433 | FunFam | Serine/threonine-protein kinase OXI1 | 260 | 377 | - | - | |
Mch9g1070 | 433 | SUPERFAMILY | Protein kinase-like (PK-like) | 30 | 387 | IPR011009 | - | |
Mch9g1070 | 433 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Mch9g1070 | 433 | MobiDBLite | consensus disorder prediction | 237 | 264 | - | - | |
Mch9g1070 | 433 | Pfam | Protein kinase domain | 33 | 201 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g1070 | 433 | Pfam | Protein kinase domain | 258 | 358 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g1070 | 433 | Gene3D | Phosphorylase Kinase; domain 1 | 32 | 125 | - | - | |
Mch9g1070 | 433 | MobiDBLite | consensus disorder prediction | 193 | 210 | - | - | |
Mch9g1070 | 433 | MobiDBLite | consensus disorder prediction | 193 | 220 | - | - | |
Mch9g1070 | 433 | PANTHER | FLIPPASE KINASE 1-RELATED | 11 | 393 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Mch9g1070 | 433 | MobiDBLite | consensus disorder prediction | 241 | 256 | - | - | |
Mch9g1070 | 433 | Gene3D | Transferase(Phosphotransferase) domain 1 | 258 | 377 | - | - | |
Mch9g1070 | 433 | ProSiteProfiles | Protein kinase domain profile. | 32 | 358 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g1070 | 433 | MobiDBLite | consensus disorder prediction | 405 | 427 | - | - | |
Mch9g1070 | 433 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 163 | 175 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch9g1070 | 433 | Gene3D | Transferase(Phosphotransferase) domain 1 | 126 | 196 | - | - | |
Mch9g1070 | 433 | SMART | serkin_6 | 32 | 358 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0126 | Mch-Chr2:950446 | Mch9g1070 | Mch-Chr9:9970923 | 1.47E-94 | dispersed | |
Mch8g3098 | Mch-Chr8:33399904 | Mch9g1070 | Mch-Chr9:9970923 | 8.25E-60 | dispersed | |
Mch9g1070 | Mch-Chr9:9970923 | Mch9g1833 | Mch-Chr9:20125759 | 7.08E-30 | dispersed | |
Mch9g1070 | Mch-Chr9:9970923 | Mch2g0265 | Mch-Chr2:1980006 | 4.51E-68 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77694 | PF00069 | Pkinase | 1.80E-29 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch9g1070 | K20714 | - | csv:101223223 | 592.808 |