Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1070 ATGAACGATGTGAGGGATCAGCAGCGGAATGCGAATGATCTTCATCATCAACATCACCGTCGAGAGGAAATCCCGGAGCTGGATTTCGAGAAGTTGGAGGTCGTGACGGCGCTCGGCCGGGGGGCGAAGGGAGTGGTGTTTCTGGCGCGGAATGCGACGGAGAACGACGGCGAATGGCTGGCGCTCAAGGTCATTTCCAGGGCGTTGATCGAGAGGAAAGCCACGGTCGTAAGTACCGATGGATCCGAGTACCGGAGAGTCTGCTTCGAACGGGAGGTTTTGCGTCTGTTTCGGCATCCTCTGTTGCCGCGATTGCGCGGCGTTTTGGATACTCAGAAAGTCGTAGGCTACGCCATTGATTATTGCGCAGGACGAGATCTTAATACTCTCCGGAAGAAACAGACCGAGAAGATGTTCTCCGATGACGCTATCAGATTTTACGCTGCGGAATTAGTTATGGCGTTGGAGTATGTACACAGCTTAGGAATAGTTTACAGAGATTTGAAGCCGGAGAACGTCATGGTTCAACAGAACGGCCATGTGATGCTTGTCGATTTTGATCTCTCTACAAGGCTCTCTCAGAGATCTCCTAAATCGTCTCCTACACCATCGCCGAAGGTTTCGACGGAATCCAAATCGGCGAAGATGAGGAAGAAGAAGAAGCGATTCGTTTCATTTAACCGATTCTGCAACTCTGGCGTTTCGCCGGAGGACTCGCTGTACCGCCCCGATCAACGGGCGGAGAAACCTAAATGGCCGCCGGACGCGTCGGAATCGGAGAAGTCGAACTCGTTCGTGGGGACGGAGGAGTACGTGGCGCCGGAAATCGTGGCCGGGAAGGGGCATGACTTCGCCGTCGACTGGTGGTCCCTCGGCGTTGTTCTGTACGAGATGCTGTACGGGACGACGCCGTTTAGGGGATCGAATCGGAAGGAAACGTTCTACCGGATTCTGACAATGTCGCCGGATCTGTGCGGGGAAGCGACGCCGTTGAGAGACTTAATCAGGAAACTGCTGGAGAAAGATCCGGCGAAAAGGATCGAACTCGACGAGATCAAGGGCCACAATTTCTTCAGAGGAACCGATTGGGATTTGGTTTTGCAAATTCCGCGGCCGCCGTCGCTGCCCGGGATGGAGGCGGCCGCGGAGGACACAGAAGGAAATAACACAATTGATGTGGAGTCCTTTGTCCAAGACGTATTTTGCAGCCGCGAATCGGAGAAGAAGAATCATAATAATGGTGAAGAAGGAAAGGGATTTAATCCTAATTACACGGAGTCTGACAGATTTCTTGTGTTCTGA 1302 52.92 MNDVRDQQRNANDLHHQHHRREEIPELDFEKLEVVTALGRGAKGVVFLARNATENDGEWLALKVISRALIERKATVVSTDGSEYRRVCFEREVLRLFRHPLLPRLRGVLDTQKVVGYAIDYCAGRDLNTLRKKQTEKMFSDDAIRFYAAELVMALEYVHSLGIVYRDLKPENVMVQQNGHVMLVDFDLSTRLSQRSPKSSPTPSPKVSTESKSAKMRKKKKRFVSFNRFCNSGVSPEDSLYRPDQRAEKPKWPPDASESEKSNSFVGTEEYVAPEIVAGKGHDFAVDWWSLGVVLYEMLYGTTPFRGSNRKETFYRILTMSPDLCGEATPLRDLIRKLLEKDPAKRIELDEIKGHNFFRGTDWDLVLQIPRPPSLPGMEAAAEDTEGNNTIDVESFVQDVFCSRESEKKNHNNGEEGKGFNPNYTESDRFLVF 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9970923 9973170 + MC09g0865 Mch9g1070 697952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1070 433 FunFam Serine/threonine-protein kinase OXI1 126 194 - -
Mch9g1070 433 FunFam Serine/threonine-protein kinase OXI1 260 377 - -
Mch9g1070 433 SUPERFAMILY Protein kinase-like (PK-like) 30 387 IPR011009 -
Mch9g1070 433 MobiDBLite consensus disorder prediction 1 21 - -
Mch9g1070 433 MobiDBLite consensus disorder prediction 237 264 - -
Mch9g1070 433 Pfam Protein kinase domain 33 201 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1070 433 Pfam Protein kinase domain 258 358 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1070 433 Gene3D Phosphorylase Kinase; domain 1 32 125 - -
Mch9g1070 433 MobiDBLite consensus disorder prediction 193 210 - -
Mch9g1070 433 MobiDBLite consensus disorder prediction 193 220 - -
Mch9g1070 433 PANTHER FLIPPASE KINASE 1-RELATED 11 393 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Mch9g1070 433 MobiDBLite consensus disorder prediction 241 256 - -
Mch9g1070 433 Gene3D Transferase(Phosphotransferase) domain 1 258 377 - -
Mch9g1070 433 ProSiteProfiles Protein kinase domain profile. 32 358 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1070 433 MobiDBLite consensus disorder prediction 405 427 - -
Mch9g1070 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g1070 433 Gene3D Transferase(Phosphotransferase) domain 1 126 196 - -
Mch9g1070 433 SMART serkin_6 32 358 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0126 Mch-Chr2:950446 Mch9g1070 Mch-Chr9:9970923 1.47E-94 dispersed
Mch8g3098 Mch-Chr8:33399904 Mch9g1070 Mch-Chr9:9970923 8.25E-60 dispersed
Mch9g1070 Mch-Chr9:9970923 Mch9g1833 Mch-Chr9:20125759 7.08E-30 dispersed
Mch9g1070 Mch-Chr9:9970923 Mch2g0265 Mch-Chr2:1980006 4.51E-68 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77694 PF00069 Pkinase 1.80E-29 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1070 K20714 - csv:101223223 592.808