Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1150 ATGCCTTCCTTCTTCTTCCTCCCCGCAATGTCCGCCGTACGCCTCTTTTCCGCCTTCTTTTTCCTCCTTCTCTCCCCCCTTTCCGCCGCCGCTCACCGGAGCCTCCCCCACCGCCACCTCCTCCACCAGCCCTTCTTCCCATGGGCTTCTTCTCTTCCTCCGGCTCTGCCTCCGTCTTCTTCCTTTTCCCCTCAGCCGCAGCCTCAGCCGCAGCAGCAGCCTAAGCTTCCGTTTTCCTCCATTTCCTACTCCTCCCCCCCCAAACCCTTCTTTCCCTCCTATTCCGCTTCTCCGCCGCCGCCCTCGCCGCCCTCCACGGCGCTTCCTACTTTTCCGGCCAACATTTCCGCTCTTCTCTTCCCTCAGCCCACTTCTTCCCAACACCTCCACCGCCATGTCTTCGCCGTTGTTATCTCTGTTTCTCTCGTTTCCTCTGTTCTTGTCTTGCTCGTTGCTCTGTTTTTCTACTTCCGGCGACGGAACCGTCAGATTTCCGCCACCGATAAGGCCTTGGGGACTGATAATCTCCGGCTGTACCCACCGGACATTGACACCTCCGACGGCCTTCACAAGAACCGCACTACCTCCTCCGCCGCGACCTCCAAGTTTCTCTATCTCGGAACTCTGGCCACTTCTCGGGAGATTGAATCGGAAGCTCCTGATGCTGCAGCGGAAGACGGTGGCGCCGGGATCGTGGAATCGGAATCGGTTAAGATGGGCTCGCCGGAGCTTAAGCCACTCCCGCCGCTTCCTCGCCGCAACTTCGCCGAAGATTACAGGAAACCGGACGGAGATTATAATGGCGGCGGCAATGACGACGGCGGCGGCGACTACGATGAGGAAGAGGAGTTTTTCTCGCCGAGAGGGTCTTCCGGCGGGAAAAGATCGAGCCCGGTGGAACTGTTTAAGGGTGTGGAAACTGATCATTTTGCGAGAAGAAGCTTTAATTCCAGTTTTAATTCGGGTTCTCCCTCTGTTTCTGTCCCCAATAGTCCTTCTCCGCCATTGATTCTGAGCCCCACCAGCTTGAGATCGAAATCCCCCGACTCCATCATTAGATTCCCAGCTCCGTTGAGGCCATTTCCATTGCGCCCGGTCCCGCCATCGCCGTCGTTGTCCTCTGCTTCTTCGCCGCTGGGAGGCTCCGGGAATACCAAGAACTCGCCATCAAGGGACTCTGATTTCTCGGAGCTGCACCGACAATTTTCGAACGGATTACAGACAGATTACGGGCAACCGTTGCCGGTGAAGCTGCCGCCTCCAGCACCGCCGCCACCGCCTCCTCGATTGTTCTGGGAGATTCCTCCTCCATCTAACTCCCTCCGCACCAAGGAGCCTAATCCAGGTCCGCCAGTTCTCTCCGTGCCTTCAAGACCGATACTCTCACAGAACATAGCTCATATTTCAGCGGGCGAGCACTCAAACACCATGGGAGATGCAGAGAGAATGGAGGACAATTCAAAGCCGAAACTGAAGCCATTACATTGGGACAAAGTTCGAACGAGCTCCGATCGAGCTATGGTGTGGGATCAGATCAAGTCAAGTTCTTTTCAGTTGAATGAGGAGATGATTGAATCACTTTTTATGGTGAATAATAACAATAATAATAATTCAAATCTGATGGGCAAAGAAAATGGTGGTGCTTTTGGGAACCAAGAGAATCGAGTTCTTGATCCTAAGAAGTCACAGAATATTGCAATTTTGTTGAGGGCTCTCAATGTCACCATTGAAGAAGTCTCTGAGGCCCTTTTGGAAGGAAATTCAGATACTTTGGGTACTGAGCTTCTCGAAAGTTTGCTGAAAATGGCGCCAACCGCAGAAGAAGAGCGTAATTTGAGAGAGTACAAGGACGATTCGCCTTTTAAACTTGGTCCAGCTGAGAAATTCCTCAAGGTAGTTCTTGATGTGCCTTTTGCATTCAAGAGGGTGGATGCAATGCTTTACATTGCCAATTTCGACTCTGAAATCGAGTACCTCGAACGATCCTTTGAAACTCTCGAGGCTGCTTGTAGAGAATTGAAGAACAGTAGAATGTTTCTCAAACTTCTTGAAGCAGTACTCAAAACTGGGAACCGGATGAACGTTGGCACGAACCGAGGCGATGCTCATGCCTTTAAACTCGACACCCTTCTCAAGCTTGTCGATGTCAAGGGGACCGATGGGAAGACCACTCTCCTGCATTTCGTAGTGCAGGAGATCATTAGAGCTGAAGGTTATCGACACTCCACCTCTGATCAGAACCTGACAGCTGATAAAACCCAACAATCTTCCTTAACAAACGATGTCGAGTTCAGAAAGCTTGGTCTTCAAGTTGTTTCAGGTCTTAGCAGGGAGCTCTCGAGTGTAAAGAAAGCTGCATTAATGGATGCAGATGTGCTTAGCAGTGACGTAACAAAACTCGCTGGAGGGATCACAAAAATCACCGAGGTCATTAGATTAAATGAAGACATGTTGAAAGGAGGGAGTAGCTCAAGTTTCTCGGACTCGATGAACAGGTTCTTGGGGAAGGCAGCTGGAGAAATAGCAAGGATACAAGTCCAAGAGGGCATTGTTCTTGCCATGGTAAAGGAAATTACCGA 2579 51.3 MPSFFFLPAMSAVRLFSAFFFLLLSPLSAAAHRSLPHRHLLHQPFFPWASSLPPALPPSSSFSPQPQPQPQQQPKLPFSSISYSSPPKPFFPSYSASPPPPSPPSTALPTFPANISALLFPQPTSSQHLHRHVFAVVISVSLVSSVLVLLVALFFYFRRRNRQISATDKALGTDNLRLYPPDIDTSDGLHKNRTTSSAATSKFLYLGTLATSREIESEAPDAAAEDGGAGIVESESVKMGSPELKPLPPLPRRNFAEDYRKPDGDYNGGGNDDGGGDYDEEEEFFSPRGSSGGKRSSPVELFKGVETDHFARRSFNSSFNSGSPSVSVPNSPSPPLILSPTSLRSKSPDSIIRFPAPLRPFPLRPVPPSPSLSSASSPLGGSGNTKNSPSRDSDFSELHRQFSNGLQTDYGQPLPVKLPPPAPPPPPPRLFWEIPPPSNSLRTKEPNPGPPVLSVPSRPILSQNIAHISAGEHSNTMGDAERMEDNSKPKLKPLHWDKVRTSSDRAMVWDQIKSSSFQLNEEMIESLFMVNNNNNNNSNLMGKENGGAFGNQENRVLDPKKSQNIAILLRALNVTIEEVSEALLEGNSDTLGTELLESLLKMAPTAEEERNLREYKDDSPFKLGPAEKFLKVVLDVPFAFKRVDAMLYIANFDSEIEYLERSFETLEAACRELKNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGTDGKTTLLHFVVQEIIRAEGYRHSTSDQNLTADKTQQSSLTNDVEFRKLGLQVVSGLSRELSSVKKAALMDADVLSSDVTKLAGGITKITEVIRLNEDMLKGGSSSSFSDSMNRFLGKAAGEIARIQVQEGIVLAMVKEIT 859
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12132431 12136618 - MC09g0895 Mch9g1150 698032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1150 859 MobiDBLite consensus disorder prediction 56 73 - -
Mch9g1150 859 PANTHER FORMIN-RELATED 19 859 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Mch9g1150 859 MobiDBLite consensus disorder prediction 56 78 - -
Mch9g1150 859 MobiDBLite consensus disorder prediction 316 457 - -
Mch9g1150 859 MobiDBLite consensus disorder prediction 441 455 - -
Mch9g1150 859 Coils Coil 656 676 - -
Mch9g1150 859 SUPERFAMILY Formin homology 2 domain (FH2 domain) 419 858 - -
Mch9g1150 859 MobiDBLite consensus disorder prediction 414 434 - -
Mch9g1150 859 ProSiteProfiles Formin homology-2 (FH2) domain profile. 481 859 IPR015425 -
Mch9g1150 859 SMART it6_source 481 859 IPR015425 -
Mch9g1150 859 MobiDBLite consensus disorder prediction 233 298 - -
Mch9g1150 859 MobiDBLite consensus disorder prediction 358 372 - -
Mch9g1150 859 Gene3D Formin, FH2 domain 480 859 IPR042201 -
Mch9g1150 859 MobiDBLite consensus disorder prediction 373 391 - -
Mch9g1150 859 Pfam Formin Homology 2 Domain 484 858 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2239 Mch-Chr6:24610220 Mch9g1150 Mch-Chr9:12132431 3.56E-154 dispersed
Mch9g1150 Mch-Chr9:12132431 Mch9g2201 Mch-Chr9:22560713 1.65E-72 dispersed
Mch9g1150 Mch-Chr9:12132431 Mch2g0617 Mch-Chr2:4239331 9.56E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1150 K28090 - csv:101213912 994.186