Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1209 ATGGAGGCCGGCGGAAGCACTTTGGGTCCGCCGCCGCCGCCGCAGCATTGCGTTGAGATCCACGCGGTGGTTCCGCCGCCGCGCAGAAGCGGCATGCAGAGGCTCCGGAACCGCCTGAAGGAAACGTTCTTCCCAGACGACCCGCTCCGGCAGTTCAAAGGTCAGTCTCCGGCCACAAAATGGCTGCTCGCTGCTCAGTATGTTTTCCCCATTCTTCAGTGGGGCCCACATTATACCCTCGCCCTCTTCAAATCCGACGTCGTTTCCGGCCTCACCATCGCCAGCTTGGCCATCCCTCAGGGTATCAGCTATGCCAAGCTTGCTAACTTGCCTCCCATTGTTGGGCTTTATTCAAGCTTTGTTCCTCCTCTGGTATATGCCGTTCTGGGAAGCTCAAGAGACCTCGCGGTCGGGCCGGTATCGATAGCGTCTCTAATACTCGGGTCGATGCTGAGGCAAGAGGTTTCTCCGGTGAAGGATCCGATACTGTTTCTCCAACTCGGCTTCACTTCCACCTTCTTCGCAGGCCTCTTCCAGGCCTCCCTCGGCTTCTTGAGACTCGGGTTTATAATCGATTTTCTGTCGAAGGCGACTCTGGTTGGATTCATGGCGGGAGCCGCCATTATTGTGTCTCTACAGCAGCTGAAGGGCCTTCTTGGAATCACCCATTTCACCAAACAGATGGGTTTGGTTCCTGTTCTCACCTCTGTTTTCCATAACACTCACGAGTGGTCATGGCAGACTATACTGATGGGCGTTTGTTTCCTTCTCTTTCTTCTGCTGGCCAGACACATCAGTTTGAAAAAGCCAAGGCTGTTTTGGGTGTCAGCGGGAGCTCCTTTGGCGTCGGTAATTCTTTCAACCATATTGGTTTTTGCCTTCAGAGCTGATCGGCATGGCATTAGCATAATAGGAAAATTGGAAGAAGGATTGAACCCACCATCATGGAACATGCTTCGTTTTGGAAGCTCTCATCTTATCCTCGTCCTCAAGACTGGCCTCGTCACTGGAATCATCTCTCTCACCGAAGGAATCGCCGTCGGCCGAACATTCGCCGCCCTCAAGGACTACCGCGTCGACGGCAACAAAGAGATGATCGCAATCGGCCTCATGAACGTCGTCGGCTCCTTCACCTCCTGCTACATCACCACAGGCGCGTTCTCTAGGTCGGCCGTGAACCACAACGCCGGGGCCAAGACGGCGGTGTCGAACATCGTGATGTCGGTGACGATCATGGTGACGCTGCTGTTCCTGATGCCTCTGTTTCAGTTCACGCCCAATCTGGTGCTGGCCGCCATCATCGTCACCGCCGTCGTCGGCCTCGTCGATCTCCCCGCCGCCTACGCCGTTTGGAAGGTCGATAAGTTCGATTTCCTCGTCATGCTCTGCGCCTTCTTCGGCGTCATTCTCGTCTCCGTCCAACATGGTCTCGCCATTGCTGTTGGCATATCCATTTTCAAGCTCATCTTTCAAATCACTAGGCCAAAAACAGTGATGTTGGGGAACATACCTGGAACAGATATATATAGGAACCTTCACCATTACAAGGAGGCAATGAGAATCCAAGGCTTCCTCATTTTAAGCATTGAAGCTCCAATCAACTTTGCCAACACCACTTATCTCAACGAAAGGATTTTGAGATGGATTGAAGATTATGAAGCTGAAGATCATGTTAAGGAGGCCTCTGGCCTTCAGTTTCTGATTTTAGAGTTGTCAGCTGTGAGTGCTATAGACACCAGCGGAGTTTTACTCTTCAAGGATCTAAGAAGAGCACTGGAAAAGAAAGTTTTGATAAGTCTTCCGTTGACAATATTCATACAGCTTGTGTTGGTGAATCCATTGGGTGAAGTTTTGGAAAAGTTACAAAAAGCAGATGAAAATCAAGAGATTTTGAGGCCAAATAATGTGTTCTTGACAGTGGGAGAGTCCATTGGTTCACTATCAGCAACAATGAAAGGACAATCCTCAACCATA 1974 50.96 MEAGGSTLGPPPPPQHCVEIHAVVPPPRRSGMQRLRNRLKETFFPDDPLRQFKGQSPATKWLLAAQYVFPILQWGPHYTLALFKSDVVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLILGSMLRQEVSPVKDPILFLQLGFTSTFFAGLFQASLGFLRLGFIIDFLSKATLVGFMAGAAIIVSLQQLKGLLGITHFTKQMGLVPVLTSVFHNTHEWSWQTILMGVCFLLFLLLARHISLKKPRLFWVSAGAPLASVILSTILVFAFRADRHGISIIGKLEEGLNPPSWNMLRFGSSHLILVLKTGLVTGIISLTEGIAVGRTFAALKDYRVDGNKEMIAIGLMNVVGSFTSCYITTGAFSRSAVNHNAGAKTAVSNIVMSVTIMVTLLFLMPLFQFTPNLVLAAIIVTAVVGLVDLPAAYAVWKVDKFDFLVMLCAFFGVILVSVQHGLAIAVGISIFKLIFQITRPKTVMLGNIPGTDIYRNLHHYKEAMRIQGFLILSIEAPINFANTTYLNERILRWIEDYEAEDHVKEASGLQFLILELSAVSAIDTSGVLLFKDLRRALEKKVLISLPLTIFIQLVLVNPLGEVLEKLQKADENQEILRPNNVFLTVGESIGSLSATMKGQSSTI 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13275016 13284022 + MC09g0924 Mch9g1209 698091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1209 658 Gene3D STAS domain 494 648 IPR036513 -
Mch9g1209 658 FunFam Sulfate transporter 31 494 650 - -
Mch9g1209 658 PANTHER SULFATE TRANSPORTER 39 643 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g1209 658 NCBIfam sulfate permease 70 624 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Mch9g1209 658 SUPERFAMILY SpoIIaa-like 519 595 IPR036513 -
Mch9g1209 658 ProSitePatterns SLC26A transporters signature. 112 133 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Mch9g1209 658 CDD STAS_SulP_like_sulfate_transporter 515 640 - -
Mch9g1209 658 Pfam STAS domain 516 642 IPR002645 -
Mch9g1209 658 Pfam Sulfate permease family 83 463 IPR011547 GO:0016020(InterPro)
Mch9g1209 658 ProSiteProfiles STAS domain profile. 514 647 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0562 Mch-Chr5:3798306 Mch9g1209 Mch-Chr9:13275016 2.39E-245 dispersed
Mch9g0897 Mch-Chr9:6980842 Mch9g1209 Mch-Chr9:13275016 4.55E-248 dispersed
Mch9g1209 Mch-Chr9:13275016 Mch9g1753 Mch-Chr9:19471372 2.15E-10 dispersed
Mch9g1209 Mch-Chr9:13275016 Mch9g0363 Mch-Chr9:2664778 1.63E-280 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1209 K17471 - csv:101219163 1086.25