Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1237 ATGAAACTTCGGTACTCTCCGTTGTTCTTCGCGTTGTTGGTTTGCGTACTGCCTCATGTCCGAGCAGGGGATGCTGAAGCTCTGCTAGCGCTGAAGGAATCTCTCGACGCTGGAAACTCGCTGCCATGGCGAGCAAGCGGAAGCTCTGTCTGCGAATGGGAAGGCGTGAAAGAGTGCACGAATGGGCGAGTTACTAAACTCGTTTTGGAGCATCTGAATCTCTCTGGTGTTCTTAGCCAAAAGATTTTGAATCGTTTGGATCAGCTTCGTGTTCTTAGTTTCAAAGGGAATTCACTTTCCGGCGAAATCCCTGACCTCTCGGGTCTCGTTAATCTCAAGTCCCTCTACTTAAGCAACAACAACTTTTCCGGCCAGTTTCCGAGCTCCATCTCCGGACTCCACCGCCTGAAAGTCGTCGCTCTTTCCGGTAACCAAATCTCCGGCCCCATTCCCGACTCGCTCCTCAAGCTCCGCCGTCTCTACGTTCTACACCTGCAGGACAACCTACTCACCGGCGCCATCCCTCCGTTCAACCAAACCAGTCTCCGATTCTTCAATGTGTCTAACAACCGCCTCTCCGGTGACATCCCAGTAACCCCCGCCTTGGTCCGGTTCAACGCGTCGTCATTTTCCGGCAACCTGGAACTCTGCGGAGAACAGATTCAGAATACCTGTGGAAATGGTGCAGTTTCGCCATCGTTGAGCTTGAGCCCCTCTTACCCACAAACCCCGGGCTCAAGCTCGTCTTCAAGACGCACCAAATTGGTCAAAATAATAGCAGGAAGCGTTGGTGGGTTTGTGGGGTTGCTAATGTGCATTCTTCTACTGTGTATGATTTGTAAATGTAGGGAAAGAAAGAGCCTGGCGGAGGTTAGGAGTAAAGGAATCGGCGACGAAGGGGCGGCGATGGAGGAAGCATCCGGGGCCGGAACCGCCGGCGGTGGTAGAGGAGGTAACAACGGAGGAAAGCAAGTGGGATTTTCATGGGAAAGTGAAGGACTGGGGAGTCTGGTGTTCTGCGGAGCAGGAGATCAGAAAATGACATACAGCTTGGAAGATCTGCTGAAAGCTTCGGCGGAGACATTGGGCAGAGGGACCATTGGGAGCACATACAAGGCGGTGATGGAATCTGGGTATATTGTGACAGTGAAACGGCTGAAGGATGCGAGGTACCCACGAGCCGAGGAGTTCGGACGGCAGATGGAGGTTCTTGGGCGGCTCAGACACCCCAATTTGGTCCCTCTCAGAGCCTATTTCCAGGCTAAGGAGGAACGCCTGCTCGTATACGATTATTTCCCTAATGGCAGCCTCTTCTCTCTCATCCATGGATCGAGAACTTCAGGTGGCGGAAAGCCTCTTCATTGGACATCCTGCCTCAAAATAGCTGAAGACTTGGCCAATGGTCTTCTGCATATCCACCAGAACCCTGGCTTAACCCATGGAAACCTGAAATCCTCAAATGTACTATTAGGATCTGATTTCGAGTCATGCCTTACTGATTATGGTCTTAATTTATTCCGAGATCCCGATTCACTGGAAGAACCCAGTGCAACTTCACTCTTTTACCGAGCTCCCGAATGCCGCGACATCCGTAAGCCATCCACACAACAAGCTGACGTCTATAGCTTTGGTGTTCTTCTGTTGGAGCTTCTAACAGGAAAAACGCCATTTCAAGATCTAGTCCAAGAACATGGTTCCGATATTCCCAAGTGGGTTAATTCAGTTAGGGAAGAAGAGACGGAATCTGGGGACGACCCGGCTTCTGGAAACGAGGCATCGGAAGAGAAACTCCAAGCTCTTTTGAACATTGCAATGGCCTGCGTTTCACTCACACCGCATAACCGACCTACGATGAGGGAAGTTCTAAAGATGATAAGAGATACAAGAGCAGAGGCTCAAATCTCATCCAACAGTAGTGACCATTCACCAGGGAGATGGTCGGATATTGTCCAGAGTTTGCCCAGGGAAGAACATTTAAGTATTTGA 1986 50.65 MKLRYSPLFFALLVCVLPHVRAGDAEALLALKESLDAGNSLPWRASGSSVCEWEGVKECTNGRVTKLVLEHLNLSGVLSQKILNRLDQLRVLSFKGNSLSGEIPDLSGLVNLKSLYLSNNNFSGQFPSSISGLHRLKVVALSGNQISGPIPDSLLKLRRLYVLHLQDNLLTGAIPPFNQTSLRFFNVSNNRLSGDIPVTPALVRFNASSFSGNLELCGEQIQNTCGNGAVSPSLSLSPSYPQTPGSSSSSRRTKLVKIIAGSVGGFVGLLMCILLLCMICKCRERKSLAEVRSKGIGDEGAAMEEASGAGTAGGGRGGNNGGKQVGFSWESEGLGSLVFCGAGDQKMTYSLEDLLKASAETLGRGTIGSTYKAVMESGYIVTVKRLKDARYPRAEEFGRQMEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSRTSGGGKPLHWTSCLKIAEDLANGLLHIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLNLFRDPDSLEEPSATSLFYRAPECRDIRKPSTQQADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPKWVNSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLTPHNRPTMREVLKMIRDTRAEAQISSNSSDHSPGRWSDIVQSLPREEHLSI 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13889507 13895231 + MC09g0935 Mch9g1237 698119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1237 661 ProSiteProfiles Protein kinase domain profile. 356 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1237 661 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 633 IPR046959 -
Mch9g1237 661 Gene3D Transferase(Phosphotransferase) domain 1 432 647 - -
Mch9g1237 661 Pfam Leucine rich repeat 111 170 IPR001611 GO:0005515(InterPro)
Mch9g1237 661 FunFam Nuclear pore complex protein NUP107 21 176 - -
Mch9g1237 661 Gene3D Ribonuclease Inhibitor 22 179 IPR032675 -
Mch9g1237 661 MobiDBLite consensus disorder prediction 571 592 - -
Mch9g1237 661 Pfam Leucine rich repeat N-terminal domain 23 56 IPR013210 -
Mch9g1237 661 Gene3D Ribonuclease Inhibitor 180 228 IPR032675 -
Mch9g1237 661 Pfam Protein kinase domain 359 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1237 661 SUPERFAMILY L domain-like 25 214 - -
Mch9g1237 661 MobiDBLite consensus disorder prediction 632 646 - -
Mch9g1237 661 Pfam Leucine Rich Repeat 181 198 IPR001611 GO:0005515(InterPro)
Mch9g1237 661 SUPERFAMILY Protein kinase-like (PK-like) 360 634 IPR011009 -
Mch9g1237 661 MobiDBLite consensus disorder prediction 632 661 - -
Mch9g1237 661 Gene3D Phosphorylase Kinase; domain 1 338 431 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g1237 Mch-Chr9:13889507 Mch9g1940 Mch-Chr9:20871966 3.33E-76 dispersed
Mch9g1237 Mch-Chr9:13889507 Mch1g1228 Mch-Chr1:14622470 9.77E-131 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77695 PF00069 Pkinase 8.00E-36 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1237 - - - 0.0