Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1264 ATGCTTGACAAGGAATTCTTCACGGAGTATGGTGAAGCTACTCAATATGAAATTGAAGAAGTAATAGGTAGAGGGAGCTATGGCGTTGTTGCATCTGCCATAGACACTCACTCGGGTGAGAAAGTTGCCATCAAGAAGATAAATAATGTGTTCGAGCATGTTTCGGACGCCACACGAATTCTAAGAGAAATTAAGCTCCTTCGGTTTCTCCATCATCCTGATATTGTTGATATAAAACATATAATGCTCCCTCCATCCAGGAGGGAGTTCAAAGATTTATATATTGTTTTTGAGCTGATGGAGTCTGACCTTCATCATGTACTCAAGGCTAATGATGATCTCACCCCTGAACATCATCAATTTTTCTTGTATCAGCTTCTTAGAGCCTTGAAGTATATACATTCAGCACATGTGTTCCATAGAGATTTGAAGCCCAAGAATATACTTGCCAATGCAGACTGCAAACTCAAGATCTGTGACTTTGGCCTTGCTCGTGCATCTTTTACTGATGCCCCATCTGCTATTTTTTGGACTGATTATGTGGCTACTCGATGGTATCGTGCTCCTGAACTCTGTGGTTCTTTTTTCTCTAAGTATACACCAGCTATTGATATTTGGAGCATAGGATGTATATTTGCTGAAATGTTGGCAGGCAAGCCTTTATTTCCTGGGAAAAGTGTTGTCCATGAGCTGGATCTAATAACTGACTTACTTGGTACTCCTCCTGCTGAATCCATTGCCAAGATTCGTAATGAAAAAGCTAAAAGATATTTGAGTAGTATGAGAAAAAAGGCTCCAATTCCTCTGTCAAGAAAGTTCCCTAATGTAGATCCACTAGCTCTTGGTTTACTTGAGCGTCTGCTTGCATTTGATCCAGAATATCGTCCGTCCGCAGAGGAGGCATTGGCTGATCCATATTTCCATGGACTGGCAAATTTGGAGAATGAACCATCAATGCAACCCATTTCAAAACTTGAGTTTGATTTTGAAAGGAGAAAGTTGACCAAAAATGATGTCAGAGAGCTTATTTATAGAGAAATTTTAGAGTATCACCCTCAGATGCTACAGGAGTACCTCCAAGGTTCTGAGAGTCACTTCATGTATCCCAGTGGAATCGATCGATTCAAGCATCAATTTGATCATCTAGAGGAACACTCTGGTAAAGGTGAGAGAAGCAGCAGTCCACTACAAAGGAAGCATGCTTCCTTGCCAAGGGAGCGAATATGTACACCAAGAGATGAAGATGATGATGAAAACTACAAAACAGAAAAGCGGAATTCTGCTTCAAATGATTGTGGTCAGAGCTCTTCAGGATCACGAGGGCTAGACGATCTTGAACATGCTTATTCCTTGGCTGCCGAGAATGGCTCTGTTCAAGTAGACTGCAGTAATTATAATCTGTTGAAGAGTGCAAGTATTAACTGTTCAAAATGGGTAGATTAA 1443 40.75 MLDKEFFTEYGEATQYEIEEVIGRGSYGVVASAIDTHSGEKVAIKKINNVFEHVSDATRILREIKLLRFLHHPDIVDIKHIMLPPSRREFKDLYIVFELMESDLHHVLKANDDLTPEHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFTDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLAGKPLFPGKSVVHELDLITDLLGTPPAESIAKIRNEKAKRYLSSMRKKAPIPLSRKFPNVDPLALGLLERLLAFDPEYRPSAEEALADPYFHGLANLENEPSMQPISKLEFDFERRKLTKNDVRELIYREILEYHPQMLQEYLQGSESHFMYPSGIDRFKHQFDHLEEHSGKGERSSSPLQRKHASLPRERICTPRDEDDDENYKTEKRNSASNDCGQSSSGSRGLDDLEHAYSLAAENGSVQVDCSNYNLLKSASINCSKWVD 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14505988 14511688 + MC09g0950 Mch9g1264 698146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1264 480 FunFam Mitogen-activated protein kinase 102 330 - -
Mch9g1264 480 ProSitePatterns MAP kinase signature. 51 154 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1264 480 FunFam Mitogen-activated protein kinase 5 108 - -
Mch9g1264 480 Pfam Protein kinase domain 16 307 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1264 480 MobiDBLite consensus disorder prediction 426 440 - -
Mch9g1264 480 SMART serkin_6 16 307 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1264 480 Gene3D Transferase(Phosphotransferase) domain 1 102 330 - -
Mch9g1264 480 ProSitePatterns Protein kinases ATP-binding region signature. 22 46 IPR017441 GO:0005524(InterPro)
Mch9g1264 480 CDD STKc_TDY_MAPK 15 352 - -
Mch9g1264 480 ProSiteProfiles Protein kinase domain profile. 16 307 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g1264 480 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 348 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Mch9g1264 480 MobiDBLite consensus disorder prediction 383 425 - -
Mch9g1264 480 MobiDBLite consensus disorder prediction 383 440 - -
Mch9g1264 480 Gene3D Phosphorylase Kinase; domain 1 32 353 - -
Mch9g1264 480 SUPERFAMILY Protein kinase-like (PK-like) 13 311 IPR011009 -
Mch9g1264 480 FunFam Mitogen-activated protein kinase 331 353 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1593 Mch-Chr3:17881862 Mch9g1264 Mch-Chr9:14505988 6.42E-232 dispersed
Mch7g1108 Mch-Chr7:15054923 Mch9g1264 Mch-Chr9:14505988 3.02E-236 dispersed
Mch8g0123 Mch-Chr8:720477 Mch9g1264 Mch-Chr9:14505988 5.29E-111 dispersed
Mch8g0797 Mch-Chr8:5630872 Mch9g1264 Mch-Chr9:14505988 1.54E-102 dispersed
Mch8g2104 Mch-Chr8:24103632 Mch9g1264 Mch-Chr9:14505988 9.83E-51 dispersed
Mch9g1264 Mch-Chr9:14505988 Mch9g1849 Mch-Chr9:20279464 8.09E-54 dispersed
Mch9g1264 Mch-Chr9:14505988 Mch6g0417 Mch-Chr6:2759523 3.27E-260 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77696 PF00069 Pkinase 4.10E-67 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1264 - - - 0.0