Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1368 ATGGAGGTGGTTGCCGGAGTTTCTTTGAGGTGGATTTTTCCGGCGGCGGTGGCGGTGTTGGTCCATTATTTGTACTACACGGTGTGGAGGAAGACCGCGGAGGTGAGGCGGAAGCTCCGGGCGCAAGGCGTGTGGGGGCCTCCGCCGTCGGTTCTGTACGGGAACTTGCCCGAGATGCAGAAGATCCAGCTGCAGGCGGCGGTGGCGGCGCCGCCCAATCAGGCGTCGGCGATTGTGGCTCACGATTATACCTCCACTCTCTTCCCCTATTTCGTCAAGTGGACCAAAGAATACGGCCCATTGTACACGTACACGACGGGGGGGAGGCAGCATCTGTACGCGAACAAGGTGGAGATGGTGAAGGATTTGAATCTGAGCGGGAATCTGGAGTTGGGAAAGCCCTGCTTCGTGACCAAGAAGCTCGCCCCGATCCTCGGCGACAGCATCGTCCGCTCCAACGGCGCCGTTTGGGCGCAGCAGCGCAAGATCATGGCGCCCGAGTTTTTCATGGACCGGGTCCGGGCCATGGCGGCGCTCATGGCGGGCGCGGCGGAGCCGGTGCTGGAGCGGTGGGAGGGGAGGATCGACGGCGGAGGAGGGGCGGCGGAGATCGACGTGGATGAGGATCTGAGGGGGTTCTCGGCGGACGTGATTTCTAGGGCTTGCTTCGGGAGCTCCTACGCCAAGGGGAAGGAGATCTTCTCCAAGCTTAGGGATCTTCAGAAGTTGGTTAGCGAAGGAAATTTCTCCTTTGGTCACATTTCCTTCAGCGACAGATTTTTTCAACCAAGCAAGCACAGAAGAATAAAAAAGCTGGAGAAGGAGATCGAGTCATTAATATGGGAGACTGTTCAGCAGCGGCAACAAGAATGCGCCAAAACGAAGTCGTCGTCAGAGAAGGATCTCTTGCAGCTGATCATGGAGGCTGCCATGAGCGACCCGACCGTAGGAGGCTGCAGCGACTCCTCGAAAAAGTTCATCGTCGACAACTGCAAGAGCATCTACTTCGCTGGCCATGAGTCCACCGCCGTTGCTGCCACCTGGTCCTTGATGCTCCTCGCCCTCCACCCCAAGTGGCAAGATCGTATCCGCTCCGAGCTCGCGCAAGCTTGCCCCGATGGCCACCCCGACACAGCTGCGATCTCTCAACTCAAATCGGTTGGAATGGTGGTTCAAGAAACACTGCGACTGTACCCACCGGCGGCATTCGTGGCAAGGGAGGCATTCGTCGATACTCGGCTTGGCGACGTGGTGGTTCCAAAGGGTGTCTGCATATGGACATTGATTCCAATGCTGCACAGAGATGCCGAAATATGGGGCGGGGATGCGAACGAGTTCAAGCCAGAGAGGTTCGTGAACGGCATAGCGAAGGCCTGCAAGTACCCTCAGGCGTACCTGCCATTTGGGGCAGGTCCTAGACTGTGCTTAGGGAAGAACTTCGCCTTGGTTCAGTTGAAGATCATCGTTTCCATGGTAGTTTCAAAGTTTAGATTCTCACTGTCTCCTGATTATCGCCATTGTCCTTCTTATAGAATGATTGTGGAGCCTGCAGATGGTGTGAAGATTGTCTTCCAAAGGGTTTGA 1584 56.57 MEVVAGVSLRWIFPAAVAVLVHYLYYTVWRKTAEVRRKLRAQGVWGPPPSVLYGNLPEMQKIQLQAAVAAPPNQASAIVAHDYTSTLFPYFVKWTKEYGPLYTYTTGGRQHLYANKVEMVKDLNLSGNLELGKPCFVTKKLAPILGDSIVRSNGAVWAQQRKIMAPEFFMDRVRAMAALMAGAAEPVLERWEGRIDGGGGAAEIDVDEDLRGFSADVISRACFGSSYAKGKEIFSKLRDLQKLVSEGNFSFGHISFSDRFFQPSKHRRIKKLEKEIESLIWETVQQRQQECAKTKSSSEKDLLQLIMEAAMSDPTVGGCSDSSKKFIVDNCKSIYFAGHESTAVAATWSLMLLALHPKWQDRIRSELAQACPDGHPDTAAISQLKSVGMVVQETLRLYPPAAFVAREAFVDTRLGDVVVPKGVCIWTLIPMLHRDAEIWGGDANEFKPERFVNGIAKACKYPQAYLPFGAGPRLCLGKNFALVQLKIIVSMVVSKFRFSLSPDYRHCPSYRMIVEPADGVKIVFQRV 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16071232 16081057 + MC09g1027 Mch9g1368 698250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1368 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch9g1368 527 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g1368 527 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g1368 527 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g1368 527 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g1368 527 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 517 IPR050665 GO:0004497(PANTHER)
Mch9g1368 527 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g1368 527 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g1368 527 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g1368 527 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g1368 527 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g1368 527 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g1368 527 SUPERFAMILY Cytochrome P450 44 525 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g1368 527 Coils Coil 269 289 - -
Mch9g1368 527 Gene3D Cytochrome P450 26 527 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g1368 527 Pfam Cytochrome P450 86 520 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0150 Mch-Chr10:912154 Mch9g1368 Mch-Chr9:16071232 6.21E-106 dispersed
Mch6g0068 Mch-Chr6:397319 Mch9g1368 Mch-Chr9:16071232 1.28E-21 dispersed
Mch7g0831 Mch-Chr7:12885187 Mch9g1368 Mch-Chr9:16071232 1.17E-33 dispersed
Mch7g0832 Mch-Chr7:12897958 Mch9g1368 Mch-Chr9:16071232 1.93E-159 dispersed
Mch9g1368 Mch-Chr9:16071232 Mch9g2057 Mch-Chr9:21704390 4.88E-87 dispersed
Mch11g0949 Mch-Chr11:6495216 Mch9g1368 Mch-Chr9:16071232 1.84E-13 transposed
Mch1g0591 Mch-Chr1:10099310 Mch9g1368 Mch-Chr9:16071232 3.51E-145 transposed
Mch4g2441 Mch-Chr4:25354349 Mch9g1368 Mch-Chr9:16071232 2.13E-102 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1368 K20661 - csv:101216582 803.897