Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1370 ATGGAGACCTCGGCTTCCAATTCTGATCCTTTCTCCAATTCTTCGTCACCCACTACTGCTCGTAGCTCCTCCAGATTTGGGTTGTCTCTCCCTTCGATGAATTTCTTCCGTTCGCCTTTGTCCGTCATCTTGGATTACTCCGGGATTCTGCCCACCAGGGCTGTTCGTCACGAATCCGAGCCTGTCCCCGTCAACGGCGCTGCGACGCCTGATTTGCGAGTTTTTTCTCAGAATCATAATCACTTGATCACTCCTTCTTCTTCTTCTTCTTCTTCTTCTACTGCCACCACCTCATCCGGTAATTCCAGCCCCTCTGGGGAGGTCTCGATCAGGATTATTGGGTCTGGCGAGCAAGATCCTTCTTCTAGTGGCTTGCTGCCATCTCAGGCTCTGGTGGGACAGGCTGGTTATGAACAAAATAGCGGACGTTCTGTTTCCGGGGATCAGCCGGAATCCCCTGATGAGGAACGTGTTCCCTTGGTGCCCACCGCTTCTTCATCTATTCAATCTGGAAGCAGTCGCGTCGACGGAGAATCTGGAAATGGCGTGGAGGAGAGTGTCAATAGAGACTCGTCTTATCAGAGATACGATATTCAACAGGTTGCCAGATGGATTGAACAGATTCTTCCATTCTCTTTGCTACTGCTGATAGTCTTTATCCGTCAGCATTTAGAAGGTTTTTTCATCACAATTTGGATATCAGCTGTTATGTATAAGTCAAACGATATTGTCAAGAAACAGACTGCTCTAAAGGGAGAGAGGAAAATTTCTGTCCTTGCTGGTACTTCTATCGCATTTTTGGTTCATGTAATTGGAATTTACTGGTGGTCTCATACTGACGATCTTCTGTACCCACTGGTCATGCTTCCACCAAAGACAGTACCACCTTTTTGGCATGCCTTGTTCATCATTTTGGTTAACGATACAATGGCGAGGCAGGTTGCAATGGCTCTCAAGTGTTTTCTGCTTATTTACTACAAGAATGGCAGAGGCCATAATTTTCGTCGACAGGGTCAAATTTTAACTCTCGTGGAATACACTCTTCTGTTGTACCGTGCATTATTACCAACACCTGTATGGTACCGGTTCTTCTTGAACAAAGATCAAGGAAGCCTCTTTTCATCGCTGACAACAGGATTATATTTAACTTTCAAGCTAACGTCTATTGTTGAGAAGATTCAATCATTCGTTGCTGCATTTAAGGCCCTGTCACGGAAAGAAGTTCATTATGGATCATATGCCACATCAGAACAGGCAAGTACACTTATTCTGTCTGTAAATGCTGCGGGAGATCTCTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATCCTGTTACGTTGCAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTTTGAAAGAGAAAGAACTTGCCCTCTTTGTCGGGCACTGGTAAAGCCTGCAGAACTTCGAACATTTGGTGATGGGTCAACTAGCTTACTCTTCCAGTTGTTTTAA 1485 45.19 METSASNSDPFSNSSSPTTARSSSRFGLSLPSMNFFRSPLSVILDYSGILPTRAVRHESEPVPVNGAATPDLRVFSQNHNHLITPSSSSSSSSTATTSSGNSSPSGEVSIRIIGSGEQDPSSSGLLPSQALVGQAGYEQNSGRSVSGDQPESPDEERVPLVPTASSSIQSGSSRVDGESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWSHTDDLLYPLVMLPPKTVPPFWHALFIILVNDTMARQVAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSIVEKIQSFVAAFKALSRKEVHYGSYATSEQASTLILSVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 494
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 16099831 16107555 - MC09g1028 Mch9g1370 698252
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1370 494 ProSiteProfiles Zinc finger RING-type profile. 433 471 IPR001841 -
Mch9g1370 494 ProSitePatterns Zinc finger RING-type signature. 448 457 IPR017907 -
Mch9g1370 494 MobiDBLite consensus disorder prediction 136 189 - -
Mch9g1370 494 Pfam Ring finger domain 432 471 IPR001841 -
Mch9g1370 494 MobiDBLite consensus disorder prediction 162 189 - -
Mch9g1370 494 CDD RING-HC_RNFT1-like 431 471 - -
Mch9g1370 494 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 413 490 IPR013083 -
Mch9g1370 494 SMART ring_2 433 470 IPR001841 -
Mch9g1370 494 MobiDBLite consensus disorder prediction 81 109 - -
Mch9g1370 494 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 14 494 IPR044235 GO:0061630(InterPro)|GO:0061630(PANTHER)|GO:1904294(InterPro)
Mch9g1370 494 SUPERFAMILY RING/U-box 429 476 - -
Mch9g1370 494 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0595 Mch-Chr1:10143153 Mch9g1370 Mch-Chr9:16099831 9.30E-192 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1370 - - - 0.0