Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1380 TCTATGGAGGCTTCTTCTTCTTTGGATTGGGATTCTGAAATTGGGTTCCAGCCCCATGTTCTAGCTGTTGACGATAATCTCGTCGACCGTAAACTCGTCGAGAAGTTGCTCAAGAACTCCGCTTGTAAAGTAACAACAGCAGAAAATGGTCGCAGTGCTTTGGAGTTTCTGGGTTTATTGGATGATCATCAACACAGCAACTTAGAACGTAGGAGTAGATCGAAGGTGAACATGATCATCACAGATTATTGCATGCCTGGCATGTCTGGATATGAACTCCTCAAAAGGATTAAGAGATCGTCGATAATGAAGGAAGTTCCCGTGGTGATCGTATCATCAGAAAACGTCCCCACTCGCATCAACAAGTGTTTAGAGGAAGGAGCTGAGATGTTCATGTTGAAACCTTTGAAGCAATCTGATGTGGTGAAACTACTGAAATGCCAGATGATGAACTGA 456 43.42 SMEASSSLDWDSEIGFQPHVLAVDDNLVDRKLVEKLLKNSACKVTTAENGRSALEFLGLLDDHQHSNLERRSRSKVNMIITDYCMPGMSGYELLKRIKRSSIMKEVPVVIVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLLKCQMMN 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16186608 16188254 - MC09g1037 Mch9g1380 698262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1380 151 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 146 IPR045279 GO:0009736(InterPro)
Mch9g1380 151 Pfam Response regulator receiver domain 20 145 IPR001789 GO:0000160(InterPro)
Mch9g1380 151 CDD REC_typeA_ARR 20 144 - -
Mch9g1380 151 ProSiteProfiles Response regulatory domain profile. 19 149 IPR001789 GO:0000160(InterPro)
Mch9g1380 151 SMART REC_2 18 145 IPR001789 GO:0000160(InterPro)
Mch9g1380 151 Gene3D - 15 150 - -
Mch9g1380 151 SUPERFAMILY CheY-like 18 146 IPR011006 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1781 Mch-Chr4:20749729 Mch9g1380 Mch-Chr9:16186608 2.55E-48 dispersed
Mch9g1380 Mch-Chr9:16186608 Mch9g2202 Mch-Chr9:22574997 4.62E-47 dispersed
Mch9g1380 Mch-Chr9:16186608 Mch6g0185 Mch-Chr6:1237275 1.12E-47 transposed
Mch9g1380 Mch-Chr9:16186608 Mch1g0440 Mch-Chr1:8680262 1.88E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44057 PF00072 Response_reg 1.00E-22 CL0304 Mch TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1380 K14492 - csv:101208898 246.514