Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1383 ATGTCCTCCGAAGACATGAATGGGCTCAGCTCCCAGCTCGTCTTCTCCGACGAAGCCATGCCCTTCAATTGCGCCAACACGCCGCAGCGCCGAGTCGGCGACCCGGGTCCCAAAACCCGCGAGCTCTGCGGTTTCATGGACGACAAGCTCTTCCCTGTGGACCGCGACCGGTTCTTCGCGCACCAGGGCGCGGATTTCCGCCGTAGTGTGTTCAGTGACAGCCGGAATTGGAATGGGAATGGGAGTGCGAGAAGTGGGAGTGGGAAAGGATCGGAGGAGGAAGACGATGATGATGATGATGATGATGAAGAAAATGAGGTTGATGATGGTGATGATGATGTTGAGGGACTCGTATCTATGGATGATGTCAATAAGTGCAATAAAATGGCCAACCCCAACAGCAGCAACAGTGATAGAAACGATCAGAGTAGTGGCGGCTTAAAAAATGGGACGAACAAATTGGGAAATGGGAAGCCTAAGCACCATTCTTCTTTTGGTGGAACCCTGTTGGTCAAGGATGGAATGGTTGGCCCTTCAGCCAGTAACGCAGGAGCAACGCAGAGTGAGAATCATCCTCAGGCAAGGTTGGGGAATTACCCTAATGCGGTTACAATTGCAGAACCTGATGGTGATGCTTATTATTCCCAATATTTGCAAGGCACTGAGGGGTCTGCTTCTGGCCAGAAGGATTTGGGTATGGAAAATGGATGTGGGTTTAATGGGAGAAGGGATGCTTCAATTTCGAGCGAGCCCGGAGAGTCTCTGAGAACAATTCTCGCAGACCCTGTGACGGGTGCTCTTATGGATGATGCAATGATATTACCGTGTGGGCATTCCTTTGGTAGTGGTGGAATACAACATGTTCTTAGAGTAAAATCTTGTTACTCGTGTTCTCAGTCGGTTTCTGAAGACTCTATTGCTCAGAACTTATCTCTTCAAGCTGCAGTGCAAGCATTCCGCAGGGAAGAAGAAATACTGTTTTACCGCTCACCAAAAAGGAGAAGGGAGAGGTTTGAGCAGGACAAGGGTGGTTATGGTGATTTGACTCTCATGGATACTCCAAGGGGTCGAGGTGTTCAGTTTCCTTTTGTCGTGACAGATCGGGTAATTATCAAGGGGAACAAGAGGACACCACAGCGTTTTGTGGGACGTGAGGCTGTTGTTACAACACAGTGCTTGAATGGATGGTATGTGGTGAAAACACTAGACAATGCAGAGAGTGTAAAGTTGCAGTACCGCTCGCTTGCAAAGGTTCCAAACGATGCAGCATCAAAACCGATACCAAGGAAGATCGCGCCGAATTGGCTCTAG 1311 49.35 MSSEDMNGLSSQLVFSDEAMPFNCANTPQRRVGDPGPKTRELCGFMDDKLFPVDRDRFFAHQGADFRRSVFSDSRNWNGNGSARSGSGKGSEEEDDDDDDDDEENEVDDGDDDVEGLVSMDDVNKCNKMANPNSSNSDRNDQSSGGLKNGTNKLGNGKPKHHSSFGGTLLVKDGMVGPSASNAGATQSENHPQARLGNYPNAVTIAEPDGDAYYSQYLQGTEGSASGQKDLGMENGCGFNGRRDASISSEPGESLRTILADPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVQAFRREEEILFYRSPKRRRERFEQDKGGYGDLTLMDTPRGRGVQFPFVVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKPIPRKIAPNWL 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16217605 16221913 + MC09g1040 Mch9g1383 698265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1383 436 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 8 424 - -
Mch9g1383 436 MobiDBLite consensus disorder prediction 69 196 - -
Mch9g1383 436 MobiDBLite consensus disorder prediction 126 151 - -
Mch9g1383 436 MobiDBLite consensus disorder prediction 180 196 - -
Mch9g1383 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 254 325 IPR013083 -
Mch9g1383 436 SUPERFAMILY RING/U-box 254 327 - -
Mch9g1383 436 ProSiteProfiles U-box domain profile. 254 326 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Mch9g1383 436 MobiDBLite consensus disorder prediction 69 87 - -
Mch9g1383 436 MobiDBLite consensus disorder prediction 92 117 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g1196 Mch-Chr9:12983949 Mch9g1383 Mch-Chr9:16217605 4.14E-34 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1383 - - - 0.0