Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1386 ATGGAAATGCAGGATCCCACCAATCCAAATCCGGGTTCTCATCTCCAAAACCACGTCTCCTCTAACTCTCCAATGCCTTCCTCTTCCAATCCCACCCCATTCCGCGGCTCCTTCCACCGCCGCGCCCATTCCGAGGTCCATTTCCGGATTCCCGACGATCTCGATCTCGTCTCCGACCCTTTCGATGCCCCATCTTCTGGATTTGGAGATCTGGGCTTCGAAGACGACCTCTTGTGCACCTTCATGGACATCGAGAATATTGGATCCAGAATCGAAAATGGGCCCTCCAAGCCTGAAGCTGCCGGTGTCGGTGGTCCGCCGGTGGAGAATGTTGAAGGGGAGAAAATCTCCCGGCCCAGGCACCGCCATAGCAATTCCGCGGATGGCTCTTCTATTATGGAGTCTATTGAGGCTAAGAAGGCCATGGATCCTGATAAGCTTGCTGAGTTGTGGACCATTGATCCTAAGCGAGCCAAGAGGATTTTGGCAAATAGACAGTCTGCTGCTCGGTCAAAAGAGAGGAAAGCTCGCTACATAATGGAACTTGAGAGAAAAGTTCAAAGTCTTCAGACTGAAGCAACTACTCTTTCTGCGCAGCTCACATTGTACCAGAGAGATACTACAGGGCTTTCAACTGAAAACACGGAACTCAAACTTCGCTTACAAGCTATGGAACAACAAGCTCATTTACGTGACGCTCTAAATGAAGCATTGAAAAAGGAAGTTGAGCGGCTCAAGGTTGCTACCGGAGAAGTAATGACAGCTACAGATTCGTATAACTTTGGAATGCCTCAAGTTTCATATCCCCGATCTTGCTTTCCACACCAACCACAATCTGTGCAACACAACCCACACAGGACGCAAAGGACCCAAGTTCATCCATTCCAGTCTAGTTTCCCGAACCCGCATCAAGCCATGTTTGTTACCTCCCACCAGCCACATGCCTTGACAGAAATGTTCCACCAGGATCCTATTAGCCGATTACAGGGTCTCGATATCGGTAGCAGAGGTGCAGAAATAAAGTCAGAAGGTTCCTCCATATCCGTCAGTGAAAGTAGCAGCACATTTTAA 1071 49.21 MEMQDPTNPNPGSHLQNHVSSNSPMPSSSNPTPFRGSFHRRAHSEVHFRIPDDLDLVSDPFDAPSSGFGDLGFEDDLLCTFMDIENIGSRIENGPSKPEAAGVGGPPVENVEGEKISRPRHRHSNSADGSSIMESIEAKKAMDPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIMELERKVQSLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAHLRDALNEALKKEVERLKVATGEVMTATDSYNFGMPQVSYPRSCFPHQPQSVQHNPHRTQRTQVHPFQSSFPNPHQAMFVTSHQPHALTEMFHQDPISRLQGLDIGSRGAEIKSEGSSISVSESSSTF 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16236536 16243009 + MC09g1043 Mch9g1386 698268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1386 356 CDD bZIP_plant_RF2 157 206 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch9g1386 356 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 154 217 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch9g1386 356 Gene3D - 155 207 - -
Mch9g1386 356 Coils Coil 231 251 - -
Mch9g1386 356 MobiDBLite consensus disorder prediction 1 38 - -
Mch9g1386 356 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 23 310 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Mch9g1386 356 MobiDBLite consensus disorder prediction 113 127 - -
Mch9g1386 356 MobiDBLite consensus disorder prediction 91 130 - -
Mch9g1386 356 SUPERFAMILY Leucine zipper domain 156 207 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch9g1386 356 SMART brlzneu 152 216 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch9g1386 356 FunFam probable transcription factor PosF21 155 208 - -
Mch9g1386 356 Coils Coil 172 199 - -
Mch9g1386 356 Pfam bZIP transcription factor 156 211 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch9g1386 356 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0789 Mch-Chr2:5435670 Mch9g1386 Mch-Chr9:16236536 9.86E-86 dispersed
Mch4g1269 Mch-Chr4:15107203 Mch9g1386 Mch-Chr9:16236536 4.52E-10 dispersed
Mch5g0852 Mch-Chr5:6022769 Mch9g1386 Mch-Chr9:16236536 5.17E-43 dispersed
Mch5g0853 Mch-Chr5:6027882 Mch9g1386 Mch-Chr9:16236536 1.11E-51 dispersed
Mch9g1386 Mch-Chr9:16236536 Mch2g0519 Mch-Chr2:3681985 1.26E-09 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44058 PF00170 bZIP_1 1.40E-08 CL0018 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1386 - - - 0.0