Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g1394 ATGGATCTTGAGCACGGGAAGTGTTGGGATACTTCCAAGAAGGATTCTTGGAAAACGGTTCTAATCTTGGCATATCAAAGCCTCGGCGTCGTCTATGGCGATTTGAGCATCTCCCCCCTCTACGTCTACAGAAGCACTTTCGCCGAAGACATCCAGCATTCGGAAACCAACGAAGAAATCTATGGGGTTCTTTCCTTCGTCTTCTGGACTCTCACTATAGTCCCCCTTTTCAAATACGTCTTCGTGGTCCTTAGAGCTGATGACAATGGTGAAGGTGGGACTTTTGCTCTGTACTCGTTAATTTGCAGACATGCCAAAGTAAGCCTTCTACCGAACAGGCAAGTTGCAGACGAAGCTCTGTCCACTTACTTGCTGGAACATCCGCCGGAGAAGAAGAAGCAATCGAGGGTTAAATTGCTGCTCGAGAAGCACAGGGCTCTGCACACTGCCTTGTTGATTCTGGTTCTTCTTGGGACTTGTATGGTCATTGGAGATGGGCTGCTTACTCCTGCCATTTCTGTTTTCTCAGCAGTTTCTGGCCTTGAGTTATCCATGACCAAAGCTCACCATCAGTATGCCGTGGTTCCGATCACTTGCTTTATCCTGGTTTGTCTATTTGCACTTCAACACTACGGCACACATCGAGTCGGCTTCGTCTTTGCTCCTGTTGTATTGACATGGTTACTCTGCATCAGTACTCTTGGCATATACAATATTATACGCTGGAATCCACATGTTTATCAGGCTCTTTCTCCGTATTACATGTTCAAGTTTCTGGAGAAGACGAGGAAGAGTGGTTGGATGTCGTTGGGCGGTATATTGTTGTGCATAACAGGCTCAGAAGCAATGTTTGCTGATCTTGGCCACTTCTCATACACTGCAATACAGATTGCTTTCACCTTTCTGGTGTATCCAGCGCTTATATTGGCATACATGGGCCAAGCTGCTTACTTATCACAACATCATAATACCACCAACAACATTGGCTTCTATGTTTCTGTTCCAGAGAGTGTGAGATGGCCGGTGCTTACGATCGCTATACTTGCTTCGGTTGTGGGAAGCCAAGCGATCATCAGTGGAACATTCTCCATTATTAATCAGAGCCAGTCCCTTGGGTGCTTTCCTAGAGTGAAGGTTGTTCACACCTCTGATAAGATCCATGGCCAGATCTACATCCCAGAGATCAATTGGGTACTAATGATTCTCTGCGTTGCCGTGACCATTGGATTCAGAGACATAAAACACCTTGGAAATGCATCAGGTCTAGCTGTTATGACTGTGATGCTTGTGACAACCTGCCTTACTTCTTTGGTGATTGTCCTCTGTTGGAACAAATCTCCTCTTTTTGCGCTCTCCTTTTTGGTCTTCTTTGGGTCTGTTGAATTGCTCTACTTCTCAGCTTCACTAACCAAGTTCAGGGAAGGTGCTTGGCTCCCAATTCTCCTAGCTCTCTTCCTCATGACCATCATGTTTGTTTGGCACTATGCAACCATTAAGAAGTATGAATTTGATCTTCACAACAAGGTTTCATTAGAGTGGTTGCTAGCATTGGGGCCGAGCCTTGGGATCGCCCGTGTCCCCGGCATTGGTTTAGTTTTTACTGATCTCACCTCTGGCATCCCTGCCAACTTCTCCCGCTTCGTCACCAACCTCCCAGCATTCCATCGCATCATCGTCTTTGTGTGTATAAAGTCGGTACCGGTTCCTTTTGTACCTCCGGCTGAGCGGTATCTCGTAGGACGAGTTGGCCCAGCCACGCATCGGTCGTACCGGTGCATTGTTCGATATGGCTACCGTGATGTTCACCAGGATGTGGATTCATTCGAGTCTGAATTAGTTAAGAAACTGGCAGATTTCATCCGCTATGACTGGTACAGGAAGCAACGAGGCAACTCTTGCAGTGAGGATGATGCATCGCGATCAAATGAATCAACGAGTGAGCGCAGGTTGGCTGTGATTGGAACAGTGGTATTTGCAGGCGCAACCGCTTACGAGGAGACTGTGCAGCCAGCGAGCGTATCAGTTGGCTTCCAGACCGTCGACAGCATTGGTGACGTGATCGAAATGGAGCCACTCGGAGAAGAAAGACGAGTCAGGTTTGCCATAGACGATGATTTTGAAGGCGACTCACAAGCTGAAACAGAAGCCCTTCTGCACGAAGAACTGGAAGATCTAGTAGCAGCCCAACAATCTGGAACGGCGTTCATTCTCGGGCACTCGCACGTCCGGGCAAAGCAAGGATCGTCTTTGTTGAAGAGGCTAGCCATTAACTATGGGTACAACTTCCTGAGAAGGAATTGCAGAGGCGCAGACGTTGCTCTTAAGGTGCCACCAGTGTCTCTTCTTGAAGTTGGAATGGTTTATGTTGTATGA 2373 47.58 MDLEHGKCWDTSKKDSWKTVLILAYQSLGVVYGDLSISPLYVYRSTFAEDIQHSETNEEIYGVLSFVFWTLTIVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQVADEALSTYLLEHPPEKKKQSRVKLLLEKHRALHTALLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMTKAHHQYAVVPITCFILVCLFALQHYGTHRVGFVFAPVVLTWLLCISTLGIYNIIRWNPHVYQALSPYYMFKFLEKTRKSGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSQHHNTTNNIGFYVSVPESVRWPVLTIAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWVLMILCVAVTIGFRDIKHLGNASGLAVMTVMLVTTCLTSLVIVLCWNKSPLFALSFLVFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMFVWHYATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRIIVFVCIKSVPVPFVPPAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFESELVKKLADFIRYDWYRKQRGNSCSEDDASRSNESTSERRLAVIGTVVFAGATAYEETVQPASVSVGFQTVDSIGDVIEMEPLGEERRVRFAIDDDFEGDSQAETEALLHEELEDLVAAQQSGTAFILGHSHVRAKQGSSLLKRLAINYGYNFLRRNCRGADVALKVPPVSLLEVGMVYVV 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16369844 16379080 + MC09g1050 Mch9g1394 698276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g1394 790 NCBIfam potassium uptake protein 23 789 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch9g1394 790 Pfam K+ potassium transporter integral membrane domain 23 515 IPR053951 -
Mch9g1394 790 Pfam K+ potassium transporter C-terminal domain 527 788 IPR053952 -
Mch9g1394 790 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 789 IPR003855 GO:0005886(PANTHER)|GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g0768 Mch-Chr9:5746091 Mch9g1394 Mch-Chr9:16369844 2.11E-194 dispersed
Mch9g1394 Mch-Chr9:16369844 Mch9g2225 Mch-Chr9:22729277 0 dispersed
Mch9g1394 Mch-Chr9:16369844 Mch8g0003 Mch-Chr8:16589 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g1394 K03549 - csv:101211022 1503.42