Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g1398 | AGAGAGAGATTCGACGAGATAGCGAAGAAGATAAAGAGAGAGACAGATGTATCATCGTCATCAAATAATCTTCCACACCAAATTATGGGAAGAAGACAGACGACGCTACAGTCTCCTCCTGGGACTCTCAACACCATTACGCCATGCGCGGCCTGCAAGCTTTTGAGAAGAAGGTGTGTCCAAGAATGCCCCTTCTCCCCATACTTCTCCCCCCACGAACCTCACAAGTTTGCCTCCGTGCACAAGGTCTTCGGTGCCAGCAACGTCTCCAAGATGCTCATGGAAGTTGCAGAGAATCAAAGAGCAGATGCTGCAAATAGCCTTGTCTATGAAGCGAATGTGAGGCTGAGAGATCCTGTGTATGGCTGCATGGGCGCCATTTCAGCTCTACAACACCAAATCCAAGCATTACAAGTTGAACTCAATGCAGTTAGAGCTGAGATTTTAAGATACAAATATAGAGAAGCTAATATCATTCACTCTTCTCCTCAACATGTGCCTTTTCTTTCGTCTTCGGCTGAGGTCGTTTCGATCGCCGTGCCACCACCACCTCCACTGTTGCCTCCACCGCCTCATTATGACGGTTCAGCTTCTTCCTCCTCTTCATTGTACAACCGGCCCGCCGTGGCGGTGGCGGCTGATTATAGTACTATTTCAAGTGATGAAAATGTTCCCTACTTTGTTAGGACTTCTACTACTCATCAATTGGATTCTTAG | 717 | 47.42 | RERFDEIAKKIKRETDVSSSSNNLPHQIMGRRQTTLQSPPGTLNTITPCAACKLLRRRCVQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVAENQRADAANSLVYEANVRLRDPVYGCMGAISALQHQIQALQVELNAVRAEILRYKYREANIIHSSPQHVPFLSSSAEVVSIAVPPPPPLLPPPPHYDGSASSSSSLYNRPAVAVAADYSTISSDENVPYFVRTSTTHQLDS | 238 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 16416749 | 16418515 | - | MC09g1052 | Mch9g1398 | 698280 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g1398 | 238 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Mch9g1398 | 238 | ProSiteProfiles | LOB domain profile. | 47 | 148 | IPR004883 | - | |
Mch9g1398 | 238 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 46 | 170 | - | - | |
Mch9g1398 | 238 | Pfam | Lateral organ boundaries (LOB) domain | 48 | 145 | IPR004883 | - | |
Mch9g1398 | 238 | Coils | Coil | 127 | 147 | - | - | |
Mch9g1398 | 238 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g0126 | Mch-Chr6:743224 | Mch9g1398 | Mch-Chr9:16416749 | 8.35E-45 | dispersed | |
Mch8g2579 | Mch-Chr8:28931017 | Mch9g1398 | Mch-Chr9:16416749 | 4.83E-43 | dispersed | |
Mch9g1398 | Mch-Chr9:16416749 | Mch9g1433 | Mch-Chr9:16724604 | 4.86E-44 | dispersed | |
Mch4g2472 | Mch-Chr4:25556187 | Mch9g1398 | Mch-Chr9:16416749 | 4.59E-78 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44059 | PF03195 | LOB | 4.70E-40 | No_clan | Mch | TF |
Pathway information
